KEGG   Pectobacterium parmentieri SCC3193: W5S_2409
Entry
W5S_2409          CDS       T02514                                 
Name
(GenBank) Type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pec  Pectobacterium parmentieri SCC3193
Pathway
pec03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pec00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    W5S_2409
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pec02044]
    W5S_2409
Secretion system [BR:pec02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   W5S_2409
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Gp5_C Phage_base_V Gp44-like_2nd DUF6484 bCoV_SUD_C DUF2345
Other DBs
NCBI-ProteinID: AFI90497
UniProt: A0A0H3I398
LinkDB
Position
complement(2593163..2595301)
AA seq 712 aa
MFSRITAQLPMNGLLFWKLSGTETLSHSFVLTADLLATGARIDRHALLGQPVTFTLPTQS
LLSSRYLNGKITRVAVRSEELSGTRYAVYTLTVESDLWPMRRDRNLRIFQSQTVPQIVQT
LLKEYGVNVEMRLSGSYRVWEYCVQYQESSLDFISRLMELEGIYYWFRHEQERHTLVLCD
ATDQHKAFPGYETMTYHVTPSGGSVTEEGISQWSQAESVTPGMYSTDDYDFRKPNAWMLQ
ARQNPASPTPGSVDVYDWPGHFVDHSHGEFYTRIRQEVWQVEHHSVSGSGTATGIAPGFT
FGLLNAPHFSDNGEYLVTSATYVFEENSYASGDSGGSKHNIAFTVLPASVTFRAEPTTAW
PKTHGPQTAKVVGPQGESIWTDRYGRVKVKFHWDRLAKGDDSSSCWVRVSSAWAGQGFGG
VQIPRVGDEVVVDFINGDPDRPLIIGRVYNEASMPPWSLPAAATQMGFMSRSKDGTADTA
NALRFEDKSGEEQVWLQAQKNMDTHVKNDETHSTDSNRTKTIGGNETTKVKKNRTETVDQ
NETLTIHQNRTETVDGNETITVHSNRTETVDQNESVRIGQNQSVSVNGNQTLKVAQAKTE
TIVLASMLNVGLAQNTNIGAAYVLNVGAGWMTTVGAMHMHNVGRKYSLNVGRDIALSAGT
SAEISAENKITLACGESKIVLEKNGTITLSANNIKLVGEKVIDIDGTQIDIN
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgttctcacgcatcaccgcgcagttgccgatgaacggtctgctgttctggaaactctcg
ggcaccgagacgttgtcccactcatttgtgctgaccgccgacctgcttgccaccggcgca
cggattgaccgacatgcgctgctgggccagccggtcacgttcacactgccgacgcagagc
ctgctgagctcgcgctacctcaacggcaaaatcactcgggtcgcggtgcgcagcgaagag
ctgagcggcacgcgctacgcggtctacacgctgacggtggaatcggacctgtggccgatg
cggcgtgaccgcaatctgcgcatcttccagagtcagacggtgccgcagatagtgcagacg
ctgctgaaagagtacggggtgaatgtggagatgcgtttatcgggcagctaccgggtgtgg
gagtactgcgtgcagtatcaggagagcagcctggactttatcagccgactgatggagttg
gaggggatttactactggttccgccacgagcaggagcgccacacgctggtgctgtgcgac
gcgacagaccagcacaaggcatttcccggctacgagacgatgacatatcacgtgacgccg
tcgggtggcagcgtgacggaagagggcatcagccagtggtcgcaggcagagagcgtcacg
ccagggatgtacagcacggacgattacgattttcgcaagccaaacgcgtggatgcttcag
gcgcggcagaatccggcgtcgccgacgccgggctcggtggacgtgtacgactggccgggt
cattttgtggaccacagccacggcgagttttacacgcgtatccgtcaggaggtgtggcag
gtagagcaccacagcgtgagcgggtcgggcacagcgacgggcattgcaccggggtttacc
ttcggccttcttaacgcgccgcattttagcgacaacggtgagtatctggtgacatcggcg
acgtatgtgtttgaggaaaacagctacgccagcggtgatagcggaggctcgaagcacaac
attgcgttcacggtgctgcctgcgtcggtaacgttccgggcggagccgacgacggcgtgg
ccgaagacgcacggcccgcagacggcgaaggtggtgggcccgcagggagaatctatctgg
acggaccggtacggccgggtgaaggtaaagttccactgggaccgactggcgaagggcgac
gacagcagctcgtgctgggtacgtgtatcgagcgcctgggcgggtcagggatttggcggg
gtgcagatcccgcgcgtgggcgatgaagtggtggtggacttcatcaacggcgacccggac
cgcccgctgatcatcggccgggtgtacaacgaggcgagcatgccgccgtggtcgctgcca
gcggcggcgacgcagatgggatttatgagtcggtcgaaagacggcacggcggatacggcg
aacgcgctgcgctttgaggacaagtcgggtgaggagcaggtgtggctgcaagctcagaaa
aacatggatacgcatgtcaagaatgacgaaacccactcgactgacagcaatcgcactaaa
accattggtggcaatgaaacgaccaaggtgaaaaaaaaccgcaccgagacggttgatcaa
aatgagaccctcaccatccatcagaaccgaaccgaaaccgtggacggcaatgaaactatc
accgtgcacagcaaccgcactgagacggtcgatcagaacgaaagcgtgcgtattggtcag
aatcagtcagtcagcgtaaacggtaatcagacgctgaaggtggctcaggcgaaaactgaa
actatcgtgctggcttccatgcttaatgtgggactggcgcaaaataccaatatcggtgcg
gcctatgtgctcaacgtgggcgcgggttggatgactaccgtgggggcgatgcatatgcac
aacgtcggcaggaaatactccctgaatgtcgggcgcgatatcgcgctttctgctggcacg
tcggccgagatcagcgcggaaaacaagattacgctggcatgtggcgagtcgaagattgtg
ctggaaaagaatggcaccatcaccctcagcgcgaacaacatcaagctggtaggtgagaag
gtgatcgacattgacggaacgcagatagatatcaattga

DBGET integrated database retrieval system