KEGG   Pectobacterium parmentieri SCC3193: W5S_2422
Entry
W5S_2422          CDS       T02514                                 
Name
(GenBank) Type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
pec  Pectobacterium parmentieri SCC3193
Pathway
pec03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pec00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    W5S_2422
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pec02044]
    W5S_2422
Secretion system [BR:pec02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   W5S_2422
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 Sigma54_activat AAA_7 nSTAND3 AAA_25 Clp_N NACHT Zeta_toxin ATPase_2 AAA_14 AAA_18 AAA_33 Rad17 SRP54 T2SSE DUF815 Hpr_kinase_C
Other DBs
NCBI-ProteinID: AFI90510
UniProt: A0A0H3I4J5
LinkDB
Position
complement(2605504..2608113)
AA seq 869 aa
MSEISRAVLFGKLDTLLFTSLESATAFCKLRGNPYVELVHWLHQLMQQQEGDLQRVISHF
SLDENALTRDIVAALDRLPRGASAVSDLAEHIDSAVERAWVYASLKYGATRIRGGHLLIG
MLKTFNLANVLKGISSQFAHINADALLEQFDTVLGSSKEAQQALITPPGVDGAAPIASDS
TLAQYAQDLTARAREGHIDPVTGRDEEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGL
ALRIATGAVPAPLRDVQLWLLDIGILQAGAGMKGEFEARLQALINEVQSSPTPIVLFVDE
IHTLVGAGGQQGTGDAANLLKPALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQIQ
EPDEDKAILMLRGTVSALEKHHQVLLLDEAVSAAVKLSHRYIPARQLPDKAVALLDTACA
RVAVSQSAQPAALEDCLHRLNALEIEAEITARETKVGLGDAGRQQAIAAQRTELEAERDA
LQQRWQKERELVNQLIALCGRCVVEGEAALRDELGIARQRLREVQSETPLLFAAVDAGVV
AAVVSDWTGIPLGRMVKNEIDAVLNLADTLNQRVIGQRHGLDLIAKRVRTARARLDNPNK
PVGVFMLCGPSGVGKTETALALAESLYGGEQNVITINMSEFQESHTVSTLKGAPPGYVGY
GEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHELFFQVFDKGWMEDGEGRHIDFRNTIIIL
TSNVGTQVISALCADPELMPDPDSLSAALRKPLLEVFPAALLGRLLVVPYYPLSDAMLAK
IVQLQLARIVRRLADNHGIETEIDASVVHLIVQRCTEVESGGRMVDAILTNTLLPQMSQM
LLSAHARDEHYRRIYVRCEQGEFVCQFDI
NT seq 2610 nt   +upstreamnt  +downstreamnt
atgtcagaaatcagccgtgccgtgttattcggcaagctagatacgttgttatttacctcg
ctggaaagcgccaccgccttttgtaaactgcgcggtaatccctatgttgaactggtgcat
tggctgcatcagttgatgcagcaacaagagggtgacttgcagcgggtcatcagccatttt
tcgctggatgaaaacgcactgacgcgagatatcgttgctgcccttgaccgcctgccacgt
ggagcgagtgcagtctccgacctcgctgaacacattgatagtgctgtggagcgcgcctgg
gtttacgcctcgcttaagtatggtgccacacggatccgtggtggccatctactgatcggc
atgctgaaaaccttcaatctcgccaacgtgctgaaaggcatttccagccagtttgcccat
attaacgccgatgcgctgttggagcagttcgatacggtactcggcagcagcaaagaagcg
cagcaggcgctaatcacaccgccgggcgtagacggtgccgccccgatagccagcgatagc
acgctggcacagtacgcacaggatctcaccgcgcgggcgcgtgaagggcatattgatccg
gtcaccggacgagacgaagagattcgccagatggtggatattctgatgcgtcgccgccag
aacaatccgctgctgaccggtgaggctggcgtcggtaaaacggcggtagtagaaggactg
gcgctacggattgctacaggcgctgtgccagcaccgttgcgcgatgtgcagttgtggctg
ctggatatcggcatactacaggccggtgctgggatgaaaggtgaattcgaagcgcgttta
caggcactaatcaatgaagtgcagtccagtccaacgcccattgtgctgtttgttgatgag
atccacacgctggtcggcgcgggtggacagcagggcacgggcgatgccgctaacctgctt
aaaccggcgttggcgcgcggtcagttacgcactatcggcgcgaccacatgggctgaatac
aaaaaatatatcgagaaagatcctgcactgacacgccgcttccagactgtacagatacag
gaaccggatgaagacaaagcgattctgatgttgcgcggtactgttagcgcactggaaaag
catcatcaggtgctgctgctggatgaagcggtcagtgcggcggtgaaactgtcgcatcgc
tatattcccgcacggcagttgccagacaaagccgttgccctgcttgataccgcttgcgcg
cgggtggcggtaagccagagcgcgcagcctgcggcactggaagattgtttgcatcgcttg
aatgcactggagattgaagcagaaattaccgcgcgtgaaaccaaagtcggccttggtgac
gctgggcggcagcaggcgattgccgcccagcgcacggaactggaagccgaacgtgatgcg
ttgcagcagcgttggcagaaggaacgcgagctggttaatcaactgattgcgttgtgtggg
cgttgcgtggtggaaggtgaagcggcattgcgtgacgaattgggtatcgctcggcagcgc
ttgcgcgaggtacagagcgaaacaccgctgctgttcgcggcggttgatgctggcgtggtt
gcggcggttgtgtctgactggaccggcattcctctgggtcgtatggtaaagaacgagatt
gatgcagtactcaaccttgctgacaccctgaatcaacgcgtgattggtcagcgtcacggc
ctggatttgatcgccaaacgtgtgcgcaccgcgcgcgcgcgcctcgacaaccctaacaaa
ccggtcggcgtgtttatgctgtgcggtccgtcgggcgtcggcaaaacggaaacggcgttg
gctctggcggagtcactgtatggtggtgagcagaacgtcatcaccatcaacatgagcgaa
tttcaggaatcgcacaccgtttccacgttgaaaggtgcgcctccgggctacgtgggttac
ggcgaggggggtgtgctgaccgaagccgtgcgtcgtcgtccatacagcgtagtcttgctg
gatgagattgagaaagcgcatccagacgtacatgaacttttctttcaggtgttcgacaaa
ggctggatggaggatggcgaaggtcggcatatcgatttccgtaacaccatcatcattcta
acctccaatgtcggtacgcaggtaattagtgcgttgtgcgccgatccggaactgatgcct
gaccctgattcgctcagtgccgcgctgcgtaaaccgttgttggaggtgttcccggccgcg
ctgctggggcgtttattggtcgtgccatattacccgctgagcgatgccatgctggcgaag
attgtgcagttacaactggcacgcattgttcgccgtttggcggacaaccacggcattgag
actgagatcgatgcctccgtggtacacctgatcgtacagcgctgcaccgaagttgaatcc
ggtggccgtatggtcgatgccatcctcaccaataccctgttgccgcaaatgagccagatg
ttgctcagcgcccatgcccgcgatgaacactatcgccgtatatatgtgcgctgtgaacag
ggcgaatttgtttgccaattcgatatctaa

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