KEGG   Pectobacterium parmentieri SCC3193: W5S_2432
Entry
W5S_2432          CDS       T02514                                 
Name
(GenBank) Type VI secretion system effector, Hcp1 family
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pec  Pectobacterium parmentieri SCC3193
Pathway
pec03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pec00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    W5S_2432
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pec02044]
    W5S_2432
Secretion system [BR:pec02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   W5S_2432
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: AFI90520
UniProt: A0A0H3I4K4
LinkDB
Position
complement(2617529..2618011)
AA seq 160 aa
MAIDMFLKVDGVTGESKDANHTGWTDINSFYWGANQPGNMSVGGGGGAGKVNFVDLSVNA
LIDKSTTAILKYCASGKHLSKIELSVCKAGGQQVEYARITLEDVLVTSVNYTGSDSGDTV
GITYAFQASKVKQQYWEQTSSGSKGAESSAGWNIKENKEA
NT seq 483 nt   +upstreamnt  +downstreamnt
atggctattgatatgtttttaaaagttgatggtgtgacgggtgagtctaaagacgctaac
cacaccggctggacggatatcaattccttttactggggcgctaaccaacctggtaatatg
tccgtaggggggggcggcggggccggtaaggttaattttgtcgacctgagtgtcaatgcg
ttgatcgacaaatcaactaccgcaatccttaaatattgcgcaagtggtaagcacctttcc
aaaattgaactttcggtttgtaaagcgggcggtcaacaagtggaatatgctcgtatcact
ttagaagatgtgctcgtgacttccgttaactacactggctctgacagtggtgatactgtt
ggcattacctatgccttccaggcctcaaaagtgaaacagcagtactgggaacaaacttca
tccggcagtaaaggtgctgaaagcagtgcgggatggaatatcaaagagaataaagaggcg
taa

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