Pectobacterium parmentieri SCC3193: W5S_2457
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Entry
W5S_2457 CDS
T02514
Name
(GenBank) HTH-type transcriptional regulator AscG
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pec03000
]
W5S_2457
Transcription factors [BR:
pec03000
]
Prokaryotic type
Helix-turn-helix
LacI family
W5S_2457
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
zf-C2H2_2
HTH_31
TetR_N
Rhodanese
HTH_IclR
MarR_2
Sigma54_DBD
HTH_Tnp_ISL3
TrmB
DUF7343
HTH_38
HTH_10
HTH_6
Motif
Other DBs
NCBI-ProteinID:
AFI90545
UniProt:
A0A0H3I4M6
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All DBs
Position
2644732..2645757
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AA seq
341 aa
AA seq
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MSTMQEVAKKAGVSKATVSRVLSGKGYTSEETKALVYQAIEETGYQPNLLARNLATSKSA
CIGLVVTNTLYHGSYFNELLSQAAKKLEDNGRQLILVDGKHSADEERAAIQFLLGLRCDA
IIIYPRFLNVDQMDDIIGQHKQPIMVVNRKLRKHQSHCICCDHKGSSYNATQHLIARGHK
DIAFITGSLDSPTAIERLSGYKDALTAANIAVRDELIVRGKWTPRCGSLAIAALRDSQVS
FSAVLASNDDMAIGAMKALDEAGVAVPSDVSVVGFDDIPTAPFLKPSLSSVKDPVSDMIN
EVIHRLIAMLDGGYFSKENLFLSELRVRDSIQDGPYGNQPA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaatgcaggaagtggcgaagaaagcaggcgtatcaaaagcgacagtgtcacgc
gtgctatcaggcaaaggctataccagtgaagaaaccaaagcgctggtctatcaggccatt
gaggagaccggatatcagccaaatttactagcgcgtaatctggcgaccagcaaatcagcc
tgtattggtttggtggtgactaacacgctctatcacggcagctattttaacgaactgctg
tcacaggccgccaagaagctcgaagacaacgggcgtcaactcattctggttgacggcaaa
cacagcgccgatgaagaacgcgccgcgattcaatttctgctgggtttacgctgcgatgcg
attatcatttatcctcgttttctcaacgtggatcagatggacgacatcatcgggcaacac
aagcagccgatcatggtcgtcaaccgtaagctgcgtaaacaccaaagccactgcatttgc
tgcgatcacaagggctctagctataacgctacgcaacatctgattgcgcgcggtcataaa
gacatcgcgtttatcaccggctcgctggattcgccaaccgctatcgaacgcctttccggc
tataaagacgcgctgacagcagccaacatcgcagtacgggatgaactgattgtgagaggg
aaatggacgccgcgctgcggctcactcgccattgctgccctacgcgatagccaggtgtcg
ttcagtgccgttctcgccagcaatgacgatatggcgattggtgcgatgaaagcgttggat
gaggccggcgttgcagtcccgagcgatgtctctgtggtcgggttcgatgatattcccact
gccccgtttttgaagccgtcactctccagcgtaaaagatccggtgagcgatatgatcaac
gaagtgattcaccgcttgatcgcgatgctggacggcggctatttctcgaaagagaacctg
tttttgtctgaactgcgggtcagggactcgattcaggacgggccgtatggtaaccagccc
gcctga
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