Pectobacterium parmentieri SCC3193: W5S_2478
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Entry
W5S_2478 CDS
T02514
Name
(GenBank) Xylan 1,4-beta-xylosidase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00520
Amino sugar and nucleotide sugar metabolism
pec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
W5S_2478
Enzymes [BR:
pec01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
W5S_2478
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Gene cluster
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Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Glyco_hydro_32N
PLL
Motif
Other DBs
NCBI-ProteinID:
AFI90566
UniProt:
A0A0H3I9E3
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Position
complement(2669064..2670740)
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AA seq
558 aa
AA seq
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MIKNPIFKGFNPDPSICRRNNDYYVAVSSFEWFPGIPIYHSTDLKNWTLHTHILNDEKKV
DLTRLPSAKGIWAPCLTWCEEEQLFYVIYGVMNSMHGRYFDVDNYLITAPDITGPWSEPV
YLHSGGYDASILHDDDGRKWIVAVDWETRDGYNGAISLVEYSPETQAVIGYPKRIWSGMT
GIGAEGPHLTKRGHYYYLMCAEGGTGYGHCVTMARAEQVWGPYESDAGNPILTSVNPALF
EKNNAEYEKPDFSILGVKDYLRPECFNPEVKIQKAGHGSYVETPEGEVYLVHLCARPFRP
ELCCPLGRESAIQKMRWTTEGWMRLEGDDNMAKAVVEPSALPESPSVVTPARDDFNDDTL
ALHYYAPRIHPNSFTDLTNRASYVCLRGQESLSSTNKVSLLARKLTSVYTTVKTKMCFTP
EVFQHSAGLVLYYDNMNYLYLQKHYDEEHRCAALSVIHMENGAKREDWHASARLNADAVY
LRLTIEGRSISFGWSYDDVHYQSVGNVYETIKFSDEYSQHGEFTGTFVGIACVDSVSHQH
TAAFDFFDYQADEIRDVE
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaatcccatttttaaaggattcaatcccgatccgtctatttgtcgccgtaat
aatgattattacgttgctgtttcttcttttgaatggtttcccggaataccaatttatcat
tctaccgacttaaaaaactggacgttgcatacccatattttaaatgatgaaaagaaagtt
gatttaacgcgactgccttcagcaaagggaatttgggcaccatgcctcacctggtgtgaa
gaagaacagcttttttacgtcatttacggcgttatgaactcgatgcatggccgatatttc
gatgtagacaattatctgattacggcaccggacattacgggtccctggagcgagcctgtc
tatttgcattctggtggttatgatgcctccattttgcatgacgatgacgggcggaaatgg
attgtcgctgtcgattgggaaacgcgtgatggctacaatggcgcgatttctctggtggaa
tattcgccagaaacgcaagccgtcatcggttatccgaaaaggatctggtcgggtatgacg
gggattggtgcagaaggaccgcatctgacaaaacgaggccattattattatctgatgtgt
gcggagggcggcacgggctacgggcattgtgtgacgatggcgcgagcggaacaggtctgg
gggccttatgaaagcgatgcgggtaacccaattctcacgtcggtgaatccggcgctattt
gaaaaaaataacgcggaatatgagaagcccgatttttcgattttaggcgtgaaagactat
ctgcgaccggagtgttttaacccagaggtgaaaatacaaaaggcgggtcatggtagctat
gtcgaaacgccagaaggagaagtgtatttggtccatctctgcgcgcggccttttcgtcca
gagttatgctgccccttagggcgcgaatcggcaatacagaaaatgcgctggacgacagag
gggtggatgcggttggaaggggatgacaacatggcgaaagccgtggtcgaaccgagcgcc
ttacctgaatcgccgtcagtcgtaacgcctgcgcgcgacgactttaatgatgatacgctc
gcactgcattactacgctccgcgaattcatcctaattcatttaccgacctgacaaaccgg
gccagctatgtttgtttacgcgggcaggaatcgctcagttccacgaataaagtcagctta
ctggccagaaagttaacctctgtttatacgacagtgaaaactaaaatgtgctttacccca
gaggtgttccagcatagtgcaggactggtgttgtactacgacaatatgaactacctctat
ttacaaaagcactatgacgaagaacatcggtgtgcggcactttccgttattcacatggaa
aatggcgcgaagcgggaagactggcatgccagcgctcggcttaatgccgacgcggtgtat
ttacggctgacgattgaagggcggtcgatttccttcggctggtcgtatgacgatgtacat
tatcaatcggtcgggaatgtttacgaaacgatcaagttttcggatgaatacagccaacat
ggcgagtttacggggacgtttgttgggatcgcctgtgtagacagcgtgtcgcatcagcat
actgctgcgtttgatttcttcgattatcaggcggatgaaatccgagatgttgaataa
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