Pectobacterium parmentieri SCC3193: W5S_2625
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Entry
W5S_2625 CDS
T02514
Name
(GenBank) Periplasmic murein peptide-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec01501
beta-Lactam resistance
pec02010
ABC transporters
pec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
W5S_2625
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
W5S_2625
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
W5S_2625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pec02000
]
W5S_2625
Transporters [BR:
pec02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
W5S_2625
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Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AFI90713
UniProt:
A0A0H3I3U0
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All DBs
Position
complement(2840616..2842250)
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AA seq
544 aa
AA seq
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MNDVIKKRFKHSLLLLTLCAAGAITSVFAAQVPAGVVLADKQELVRGNSSEPASLDPHKV
ESDVEGHIINDFFDNLVRVSDDGTIQPRLAERWDNKDNTVWTFHLRPDIKWSDGSPLTAD
DVVYSWRRLGDPKTLSPYGSYIASMYVKNAADIMAGKKAPDTLGIKALDSHTVEVTLERP
LSYFLEMSAYHVLVPLPKAVLEKYPENWTQVGHFVSSGPYTMSEWVVNERIVGKRNSQYW
DDAHTVINKVTYLPISSQAAELNRYKSGEIDITGLLSPVQFASLQKEYPQEVKVSPLLST
YFYQFNTQKPPFDDVRVRRALDLSLDKTVIAEKVMGMGQKPAYSLVPQNTGGYTRQEPEW
AGWTQEQRNAEAKKLLEEAGFNAKNPLRFNLLYNTSESHLRVAIAANSMWKKNLGVEATL
QNQEWKTMLDTIRTGNYEVVRYSWNGDYNEPSTFLEILQSGNSNNNSKFSNAEYDALLQK
ALTVDSRQERQGIYQQAMTILNQQMPLLPIYYYVQPQMVKPYIGGFLPDIRGNYYTQDIY
VIKQ
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgtaatcaaaaaacgttttaaacactcgttgctactgcttactttgtgtgcc
gcgggggcgataacctcggtttttgctgcccaggttcccgccggtgtggtattggcggac
aagcaagagctggtacgaggtaatagttcagagcctgcttcgttggatccgcataaggta
gaaagcgatgtagaaggccatattatcaacgacttcttcgataatctggtgcgtgtgagt
gatgacggcacgatacagccgcgactggccgaacgttgggataataaagacaacacggtg
tggacgttccacctgcggcctgatattaaatggtctgatggttcgccgctgaccgccgac
gatgtggtttacagttggcgacgccttggcgatcctaaaacgctgtcgccttatggcagc
tatatcgccagtatgtacgtgaagaatgcggcagatattatggcgggcaaaaaggcacca
gatacgctgggcataaaggcgctggatagccataccgttgaagttacgctggaacgtccg
ctttcctatttcctggaaatgtcggcttaccatgtgttggtgccattgccgaaagcggtt
cttgaaaaatacccagaaaattggacgcaggtcgggcattttgtcagcagtggcccttat
acgatgagtgaatgggtggtgaacgaacgcatcgtcggcaagcgcaatagccagtattgg
gatgatgcgcataccgtgattaacaaagtcacgtacctgccgattagctcgcaggcggcg
gaactgaatcgttataaatcgggtgaaattgatatcacggggcttttgtcgcccgtgcag
tttgcgtcgctgcaaaaagagtatccgcaggaggtgaaagtttcgccgctgttgtctacc
tacttctatcagttcaatacgcaaaaaccgccgtttgatgatgttagagtgcgccgtgcc
ttagacctgagtttggataagacggttatcgctgaaaaagtgatgggcatggggcagaaa
cccgcatatagcctggttcctcaaaacaccggaggctatacgcggcaggagccagaatgg
gccggctggacgcaagaacagcgtaatgcagaagcgaaaaaattgctggaagaggccggt
tttaacgcgaaaaacccgctgcggttcaatctgctttataacacatcagaatcgcatcta
cgtgttgctatcgcggcgaattcaatgtggaaaaagaacctcggcgtagaggcgacatta
cagaatcaggaatggaaaaccatgctggatacgatccgcaccggcaactacgaggtggtc
cgctattcatggaatggggattacaatgaaccgagtaccttcctggaaattctgcaatcg
ggtaacagcaacaacaattctaaattcagtaacgcggaatatgatgcgttactgcaaaaa
gcgctaacggtagacagtcgacaggaaaggcaggggatttatcagcaggcaatgacgatt
ctgaaccagcagatgccactactgccgatttattattatgtccagccacagatggtgaaa
ccttacatcggtggttttttgcccgacatccgtggtaattactacacacaggatatatat
gtgattaaacagtag
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