Pectobacterium parmentieri SCC3193: W5S_2730
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Entry
W5S_2730 CDS
T02514
Name
(GenBank) Cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00450
Selenocompound metabolism
pec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
W5S_2730
Enzymes [BR:
pec01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
W5S_2730
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
W5S_2730
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AFI90815
UniProt:
A0A0H3I6H7
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Position
complement(2952522..2953745)
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AA seq
407 aa
AA seq
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MSYPIERVRADFPLLASEVNGQPLAYLDSAASAQKPQSVIEREAEFYRHEYAAVHRGIHT
LSAQATSAMEAVREQVASFINAASVEEIVFVRGTTEAINLVANSYGRTFIQPGDNLIITE
MEHHANIVPWQMLAEARGVEVRVLPLAEDGSLDVAQLPALLDERTRLLAVTQISNVLGTL
NPVKGMIAQAKAAGAVTLIDGAQSIMHQPVDVQDLDCDFFVFSGHKIYGPSGIGVLYGKR
DLLQAMPPWEGGGAMIRQVSLRTGTTYADSPWRFEAGSPNTGGIMGLGAALDYVTALGRE
EIQRYESSLMQYALEALTQVPDLTLYGPAERHGVIAFNLGQHHAYDVGSFLDRYGIAIRT
GHHCAMPLMEHYGVPSMCRASLAVYTTREEIDRLVAGLQRIHRLLGS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcctattgaacgggttcgtgccgatttcccgctgctggcaagtgaggttaac
ggccagccgttagcctatcttgatagcgcggcgagtgcgcaaaagccgcagtcggttatc
gagcgcgaagccgaattctatcgccatgaatacgccgctgtgcaccgcggtattcatacg
ctgagcgcgcaggcgaccagcgcgatggaagcggtgcgcgagcaggtggcatcctttatc
aatgctgcctcagtggaagagattgtttttgtacgcggtacaacggaggccatcaatctg
gtggctaacagttatggccgtaccttcatccagccgggcgataacctgatcatcaccgag
atggagcatcacgcgaatattgttccctggcagatgctggcagaagcgcgtggcgttgaa
gttcgcgtattgccgctggctgaagatggttcgctggatgtcgcgcagcttcctgcattg
ctggatgaacgtactcgcctgctggcagtgacgcagatatctaacgtattgggcacgctg
aacccagtaaaagggatgattgcacaggcaaaagcggcgggcgcggtgacgttgatcgat
ggtgcgcagtcgattatgcatcagcctgtcgatgtacaggatctggactgcgatttcttt
gtcttttcagggcataagatctacggtccttcgggtattggtgtgctgtacggcaaacgt
gacctgcttcaggccatgccgccgtgggaaggcggtggggcgatgatccgtcaggttagt
ctgcgaacaggcactacctatgcggattcaccgtggcgctttgaagccggctcgcctaac
acgggcggcatcatgggcctgggtgccgcactggattatgtgacggcactgggacgtgaa
gagattcagcgctatgaatcctctttgatgcagtacgcgctggaagcgttaacgcaggtg
cctgatttaacactgtatggcccggctgaacgccacggtgtgattgcgtttaatcttggg
cagcaccacgcctatgatgtgggaagtttcctcgatcggtacggtattgcgattcgcacc
ggccaccattgcgcgatgccgctgatggaacactatggtgttcccagtatgtgccgcgcc
tcgctggccgtttatactacgcgcgaagaaattgaccggctggttgccggattgcaacgt
atccatcgattgctgggcagttaa
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