Pectobacterium parmentieri SCC3193: W5S_2823
Help
Entry
W5S_2823 CDS
T02514
Name
(GenBank) DNA-binding protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pec03036
]
W5S_2823
03400 DNA repair and recombination proteins [BR:
pec03400
]
W5S_2823
Chromosome and associated proteins [BR:
pec03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
W5S_2823
DNA repair and recombination proteins [BR:
pec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
W5S_2823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
CR6_interact
DUF3037
Ntox15
SSSPR-51
Motif
Other DBs
NCBI-ProteinID:
AFI90908
UniProt:
A0A0H3I4G0
LinkDB
All DBs
Position
3051956..3052357
Genome browser
AA seq
133 aa
AA seq
DB search
MSEALKVLNNIRTLRAQAREIDLVTLEEMLEKLTVIVEDRREEEASAQQQNAERQAKIEA
LRAQLLEDGIDPSELLGSASTAKSTKSKREPRPAKYKYVDENGNEKLWTGQGRTPKAIAA
AIESGKKLEEFKI
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagcactaaaagtattaaacaatattcgtactctgcgtgctcaggcgcgtgaa
atcgatctggtgacattggaggaaatgctggaaaagctcactgtgattgtagaagatcgc
cgtgaagaagaagctagcgcgcagcaacaaaatgctgaacgtcaggccaaaattgaagcc
cttcgtgctcaacttctggaagatggcattgatccatctgaattgcttggttctgcttct
actgccaagtcaacaaaatccaaacgtgagcctcgccctgccaaatataaatatgtcgat
gaaaacggcaatgaaaaattatggacaggtcaggggcgtacacctaaagcgattgctgct
gctattgaaagcggtaaaaagctggaagagtttaagatctga
DBGET
integrated database retrieval system