Pectobacterium parmentieri SCC3193: W5S_2913
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Entry
W5S_2913 CDS
T02514
Name
(GenBank) tRNA-dihydrouridine synthase C
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pec03016
]
W5S_2913
Transfer RNA biogenesis [BR:
pec03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
W5S_2913
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
Oxidored_FMN
Motif
Other DBs
NCBI-ProteinID:
AFI90996
UniProt:
A0A0H3I624
LinkDB
All DBs
Position
complement(3133966..3134898)
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AA seq
310 aa
AA seq
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MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFLRVVDQCLPVKSFYRLCPELQHASRTP
SGTLVRVQLLGQYPQWLAENAARAVELGSYGVDLNCGCPSKLVNGSGGGATLLKDPELIY
QGAKAMREAVPAHLPVTVKIRLGWDSGSRQFEIADAVQQAGASELAVHGRTKEDGYKAEC
INWQAIGEIRQRLRIPVIANGEIWDWQSAQDCMATTGCDAIMLGRGALNVPNLSRVIKYN
EPRMPWPDVMLLLQKYVRLEKQGDTGLYHVARIKQWLGYLRKEYDDAAELFSEIRTLKTS
TDIARVIGEP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttttgcttgccccgatggaaggggttctcgactcattagtgcgagaactgctg
accgaagtaaatgactacgacctgtgcatcaccgaatttttacgcgtggtggatcagtgc
ctgccggttaaatccttttatcgcctttgcccagagttacagcatgctagccgcaccccg
tccggcacgttggtgcgcgtgcagctattgggacagtacccacaatggctggcggagaac
gccgcgcgggcagtggaactgggttcgtatggcgtcgatcttaactgtggctgtccgtcg
aagctggtgaacggcagcgggggcggtgcgacgctgttaaaagatcccgaactgatttat
cagggcgcaaaagccatgcgtgaggccgtgcctgcgcatttacctgtcacggtgaaaata
cggctggggtgggattccggctctcgccagtttgaaattgccgatgcggtgcagcaggcg
ggggcgagcgagctggccgtgcatggtcgcacgaaagaagacggttataaggccgaatgc
attaactggcaagcgatcggggaaatccgccagcgtctgcggattccggtgattgccaac
ggtgaaatctgggactggcagagcgcacaggattgtatggcgacgacgggatgcgatgcc
atcatgttggggaggggagcgctgaatgtgccgaacctgagccgcgtgattaagtataac
gaaccgcgtatgccgtggcctgacgtcatgttactgctacagaaatatgtgcggctggaa
aagcagggtgacacggggctgtaccacgtcgcgcgtatcaaacagtggctcggctatttg
cgtaaagagtacgacgatgccgccgaattattcagtgaaattcgcaccttgaagacctct
acggatatcgcccgtgtgattggtgagccgtag
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