KEGG   Pectobacterium parmentieri SCC3193: W5S_2929
Entry
W5S_2929          CDS       T02514                                 
Name
(GenBank) putative ABC transporter ATP-binding protein ybhF
  KO
K25182  drug efflux transport system ATP-binding protein
Organism
pec  Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:pec00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pec02000]
    W5S_2929
Transporters [BR:pec02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Drug efflux transporter
    W5S_2929
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_29 AAA_23 AAA_22 AAA_30 AAA MukB AAA_14 AAA_27 ATP_bind_1 CLP1_P RsgA_GTPase Mg_chelatase AAA_24 TsaE SRP54 AAA_16 nSTAND1 AAA_25 cobW DUF87 AAA_15 ORC-CDC6-like DO-GTPase2 BON_like AAA_28
Other DBs
NCBI-ProteinID: AFI91012
UniProt: A0A0H3IAU7
LinkDB
Position
3152178..3153920
AA seq 580 aa
MTDSPTQIALDRLEKRFAGQEKPALASLTAEIRSGAVTGLVGPDGAGKTTLLRMLAGLLT
PSHGSLRVANLDPINEDRQLHAILGYMPQKFGLYEDLTVMENLTLYADLRGITGDVRKGT
FDRLLSFTDLTRFTDRLAGKLSGGMKQKLGLACTLLGQPKVLLLDEPSVGVDPISRRELW
QMVHELADDGMLILWSTSYLDEAEQCRDVLLLNEGELLYRGAPRDLTARMAGRCILVDTG
TRRHRDVLQEALRLPQVSDGVIQGQYVRLMLTPDADRAALLSALHLDANSLHDTDPRFED
AFIDLLGGGPASDSSLASIMPQIDISGGETVIEAQALTKKFGDFAATDHVSFHVKRGEIF
GLLGPNGAGKSTTFKMMCGLLIPTDGKALVLDMDLKTSSGKARQHLGYMAQKFSLYGNLT
VEQNLRFFSGVYGLKGKAQRDKIAGMTEAFNFQPIYRQTPDALPLGFKQRLALACALMHE
PDILFLDEPTSGVDPLTRREFWIHINGMVNRGVTVMVTTHFMDEAEYCDRIGLVYRGKLI
ASGTPDELKHQAASAQTPSPTMEEAFIALIQAYDGEAEHG
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgactgattctcccacccagattgcgttggacaggctggagaagcgttttgccggacag
gaaaaacccgcacttgccagccttaccgccgagattcgcagcggtgccgtgaccggattg
gtcgggcctgacggcgcggggaaaaccaccctgctgcgtatgctggcgggattgttaaca
cctagccacggctcgttacgcgtcgccaaccttgatcccatcaacgaggatcgtcagctc
catgccattttgggctacatgccacaaaaattcggcctgtatgaggatctgacggtgatg
gaaaacctgacgctatatgccgacttacgcggtatcaccggcgatgtgcgcaaaggcacc
tttgaccgcttgctgtcatttaccgacttaacccgctttaccgacagactggcaggcaaa
ttgtccggcggtatgaaacaaaagttggggctggcctgtacgttactgggacaacctaag
gtgcttctgctggatgaaccgagcgtaggcgtcgatcccatttctcgccgtgagctgtgg
cagatggtgcacgaactggctgacgacggcatgttgatcttgtggagtacgtcttacctt
gatgaggcggaacagtgtcgggatgtgctgctgctgaacgaaggcgaactgctgtatcgc
ggcgcgccacgcgatctgaccgcacgcatggcgggacgctgtattctggttgacacagga
acgcgacgacatcgggatgtgttgcaagaggcgctgcgtctgccgcaggtcagcgacggg
gtgatccaggggcaatacgtccggttgatgctaacacccgacgccgatcgggcagcgctg
ctctccgccttacatctggacgccaacagcctgcacgataccgatccgcgttttgaagat
gcgtttatcgatctgctgggcggcggcccggccagtgattcatcgctggcgagcatcatg
ccgcagattgatatcagcggcggtgaaacggtgattgaagcacaagcgctgacgaaaaaa
tttggcgatttcgccgcaaccgatcatgtcagttttcacgtaaaacgcggtgaaattttc
ggcctgctcggcccgaacggagcgggaaaatcaacgactttcaagatgatgtgtggcctg
ctaataccgactgacggcaaggcgctggtgctcgatatggatctgaaaaccagctccggc
aaagcacgccagcatttgggctacatggcgcaaaagttctcgctctacggcaacctgacc
gtcgaacaaaacctgcggttcttctccggcgtctatgggctcaagggtaaagcgcagcgc
gataaaatagccggtatgaccgaagccttcaacttccaaccgatttaccgccaaacgccg
gacgccctgccactgggcttcaagcagagactggcactggcctgtgcgttgatgcacgaa
cccgacattctgtttcttgacgaacccacctccggcgtcgatccgctgacccggcgcgaa
ttctggatacacatcaatggcatggttaatcgcggtgtcaccgtcatggtcaccacccac
ttcatggacgaagccgaatactgcgaccgcatcgggctggtatatcgcggcaaactgatc
gccagcggcacgccggacgagctgaaacatcaggccgccagcgcacaaacgccgtcgccg
acgatggaagaagcgtttatcgcgctgattcaggcatacgacggggaagcggaacatggt
tga

DBGET integrated database retrieval system