Pectobacterium parmentieri SCC3193: W5S_2942
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Entry
W5S_2942 CDS
T02514
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
W5S_2942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pec03400
]
W5S_2942
DNA repair and recombination proteins [BR:
pec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
W5S_2942
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
W5S_2942
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
UB2H
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
AFI91025
UniProt:
A0A0H3I720
LinkDB
All DBs
Position
complement(3162564..3164576)
Genome browser
AA seq
670 aa
AA seq
DB search
MSKVFTLHSDFKPAGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MMLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQ
YARNDQAFQRGTFRVRGEVIDIFPAESDEIALRVELFDEEVERLSLFDPLTGHVLQTVPR
YTIYPKTHYVTPRERILQAMEDIKVELADRKKVLLANDKLVEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGGEIIDQVVRPTGLLD
PLIEVRPVATQVDDLLSEIRLRAVINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLRGKAILYGDRITASMAKAISETERRREKQEAYNTEHGIVPQGINKKISDILQLG
QSASKGKGRGNRKAAEPAARYELMTPKALELKIRELESKMLTHAQNLEFEEAAALRDEVQ
ALRAQFIAVS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtatttacactgcattccgactttaaaccggcaggcgatcagcccgaggct
attcgtcgtttaaaagaaggcctggaggacgggttagcacaccaaacgctgctcggagta
acaggttcaggtaaaacgttcacgatagccaacgtgattgccgacctcaatcggccgaca
atgatgctggcgccgaataaaacgctagccgctcaactgtacggcgaaatgaaagagttc
ttccctgataatgctgtcgagtattttgtctcttactatgactactatcagccagaggcc
tacgttccaagctcagacacctttattgagaaagatgcgtcggttaacgaacatatcgaa
cagatgcgtctttcagcgacaaaagcgctgctggagcggcgcgatgtgatcgttgtggcc
tcggtgtccgctatctacggtctgggcgatcccgatctctatctgaaaatgatgctgcat
ctaacgcaggggatgctgatcgaccagcgtgctattttgcggcgtctggcagaattacaa
tatgcccgcaacgatcaggcatttcagcgcggtacgtttcgcgtgcgtggtgaggtgatc
gatattttccctgcggagtctgacgaaatagcgctgcgcgttgaattgttcgatgaagaa
gtggaacggctgtcgctgtttgatccgttgacggggcatgttcttcaaacggtgccgcgc
tataccatctacccgaaaacgcactacgtcacgccgcgtgagcgtattttacaggcgatg
gaagacattaaagttgaattggccgatcgtaaaaaggtgttactggccaacgataagctg
gtggaagagcagcgcctgagccagcgcacgcagtttgatctggagatgatgaacgagctt
ggttactgctccggtatcgaaaactactcacgctatctttcaggtcgtggccccggtgag
ccaccgccgacgctgtttgactaccttcctgcggatgggctgttggtgattgatgaatcc
cacgtcaccgtgccccagatcggcgggatgtatcgcggcgaccgtgcgcgtaaagagacg
ctggtcgaatacggtttccggttgccttcggcgctggataaccgaccgatgaagtttgaa
gaatttgaagcgttggccccgcagacgatctatgtgtctgcgacaccgggtaactatgag
ctggaaaaatcgggcggtgaaattatcgatcaggtggttcggcccaccggattgctcgac
ccgctcattgaagtacggcctgtcgcgacacaggtggacgacctgctttccgaaattcgc
ctgcgtgcggtgattaacgaacgtgtgctggtgacgacgctgaccaagcggatggcggaa
gacctgacggaatatctggaagagcacggcgagcgggtgcgctatctgcactcggatatt
gataccgtcgagcgtgtggaaatcatccgggatttacgccttggtgagttcgatgtgctg
gtcggtatcaacctgttgcgtgaagggctggatatgccagaagtgtcgctggtggcgatt
ctggatgctgacaaagaaggcttcctgcgctctgaacgctccctgatccagacgattggc
cgcgcggcgcgtaacctgcgtggcaaggctattctttacggtgacagaattacagcgtca
atggcgaaagcgattagcgaaacagagcggcgtcgcgagaagcaggaggcgtacaacacc
gagcacgggattgtgccgcagggaattaataagaaaatttccgatattctgcaactgggt
caatcggcgagtaaaggcaaagggcgaggtaaccgtaaagcggcagaacccgcagcgcgt
tatgaactcatgacgccgaaggcgctggagctgaaaatccgcgagttggaaagtaagatg
ttaacgcacgcgcagaatcttgaattcgaagaggctgccgccttgcgcgatgaagtgcag
gcattacgcgcacaatttattgccgtctcttag
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integrated database retrieval system
