Pectobacterium parmentieri SCC3193: W5S_3025
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Entry
W5S_3025 CDS
T02514
Name
(GenBank) Outer membrane lipoprotein, group 4 capsule (G4C) polysaccharide
KO
K01991
polysaccharide biosynthesis/export protein
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
W5S_3025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pec02000
]
W5S_3025
Transporters [BR:
pec02000
]
Other transporters
Pores ion channels [TC:
1
]
W5S_3025
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SLBB_2
Poly_export
Wza_C
SLBB
JmjC_2
Motif
Other DBs
NCBI-ProteinID:
AFI91108
UniProt:
A0A0H3IB27
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All DBs
Position
complement(3252592..3253695)
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AA seq
367 aa
AA seq
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MVSVALLSGCTLIPGSHLSTNGKNVVEQQDTDFNIDKLVNVYPLTPYLVEKMRPKPLIAQ
TNPALEKELQGYEYRIGIGDVIMVTVWDHPELTTPAGTYRTAADTGNWVHSDGTIFYPYI
GKVNVAGKTVTEVRDQIMGRLAQYIESPQVDVSIAAFRSQKAYVTGEVATSGQQAITNVP
LTVLDAINRAGGLTQNADWRNIVLTHNGQEKRLSLQALMQNGDLSQNHLLYPGDILYIPR
NDDLKVFVMGEVKKQSTLKMDRSGMTLTEALGNAEGMDQTFSDATGIFVIRSLRGTQGPK
LADIYQLNAKDATAMVMGTEFRLQPYDIVYVTTAPLVRWNRVISQLVPTISGFNELTEGT
LRVRNWP
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggtagcgctacttagcggttgcactctgattcccggttcccacctttctact
aacggcaaaaatgtagttgagcagcaagatacggattttaatatcgataagctggtcaac
gtttacccgttaacgccttatttagtcgaaaagatgcgtcctaagccgctgatagcgcag
actaaccccgctttggaaaaagagttgcagggttacgaataccgaattggtattggtgat
gtcattatggttacagtatgggatcaccctgaactgacgacaccagcagggacataccgt
actgcagccgatacgggtaactgggtacactctgatgggacgattttttatccttacatc
ggaaaagtgaacgtcgcaggaaaaacagttactgaagtccgcgatcaaattatgggacgc
ttagcacagtacatcgagtcaccacaggtcgatgtcagtattgctgccttccgttcacag
aaagcctacgtgacgggtgaagtggcaacgtccgggcagcaggctattaccaacgtacct
ttgacggtgttggacgcgattaacagagctggcgggctgacgcagaatgccgactggcgg
aatatcgttctgacgcataatggacaagaaaaacgactctccctccaggcgctgatgcaa
aacggcgacctttcacaaaatcatctgctttaccccggtgatatcctctacattcctcgt
aatgacgacctaaaagtgttcgttatgggagaagttaaaaaacaaagtacccttaaaatg
gaccgtagcggcatgacgctgacggaagcgttaggtaatgcagaggggatggatcagaca
ttttctgatgctacggggatctttgttattcgttcattacgcggaacacaaggccctaaa
ctggcagatatttaccagcttaatgccaaagacgcgacagcgatggtgatgggtacggaa
tttcggctacagccttatgatattgtctatgtcaccacagccccgctcgtccgttggaat
cgcgttatcagccagcttgtgccgaccatttccggctttaatgagttaaccgaggggacg
ttacgtgttcgtaactggccgtag
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