Pectobacterium parmentieri SCC3193: W5S_3041
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Entry
W5S_3041 CDS
T02514
Name
(GenBank) DNA-binding protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pec03036
]
W5S_3041
03400 DNA repair and recombination proteins [BR:
pec03400
]
W5S_3041
Chromosome and associated proteins [BR:
pec03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
W5S_3041
DNA repair and recombination proteins [BR:
pec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
W5S_3041
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
CR6_interact
DUF3037
PQQ_syn_pqqF_N_2
SSSPR-51
DUF1902
Motif
Other DBs
NCBI-ProteinID:
AFI91124
UniProt:
A0A0H3I507
LinkDB
All DBs
Position
3276691..3277092
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AA seq
133 aa
AA seq
DB search
MSEALKVLNNIRTLRAQAREIDLATLEEMLEKLTVIVQDRREEEASTQQQNAERQAKIDA
LRAQLLEDGIDPSELLGTPSANKSTKAKREPRPAKYKYVDENGNEKLWTGQGRTPKAIAA
ALENGKKLEDFEI
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagctttaaaagtattaaacaatattcgtactctacgtgcccaagcgcgtgaa
atcgatctggcaacattggaagaaatgctagaaaagcttacggtcatcgttcaagatcgc
cgtgaagaagaagccagcacacagcaacaaaatgctgaacgtcaggccaaaattgatgcg
cttcgtgctcaacttcttgaggatggtatagatccgtctgaacttctcggcaccccttcg
gctaacaaatcaacaaaagccaaacgtgaacctcgtcctgccaaatacaaatatgttgat
gaaaatggcaatgaaaagttatggactggtcagggccgtactcctaaagcgattgctgcg
gcgcttgagaacggtaaaaagctggaagattttgagatctga
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