KEGG   Pectobacterium parmentieri SCC3193: W5S_3041
Entry
W5S_3041          CDS       T02514                                 
Name
(GenBank) DNA-binding protein H-NS
  KO
K03746  DNA-binding protein H-NS
Organism
pec  Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:pec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pec03036]
    W5S_3041
   03400 DNA repair and recombination proteins [BR:pec03400]
    W5S_3041
Chromosome and associated proteins [BR:pec03036]
 Prokaryotic type
  Nucleoid associated proteins
   HNS (histone-like nucleoid structuring protein)
    W5S_3041
DNA repair and recombination proteins [BR:pec03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      W5S_3041
SSDB
Motif
Pfam: Histone_HNS_N Histone_HNS CR6_interact DUF3037 PQQ_syn_pqqF_N_2 SSSPR-51 DUF1902
Other DBs
NCBI-ProteinID: AFI91124
UniProt: A0A0H3I507
LinkDB
Position
3276691..3277092
AA seq 133 aa
MSEALKVLNNIRTLRAQAREIDLATLEEMLEKLTVIVQDRREEEASTQQQNAERQAKIDA
LRAQLLEDGIDPSELLGTPSANKSTKAKREPRPAKYKYVDENGNEKLWTGQGRTPKAIAA
ALENGKKLEDFEI
NT seq 402 nt   +upstreamnt  +downstreamnt
atgagtgaagctttaaaagtattaaacaatattcgtactctacgtgcccaagcgcgtgaa
atcgatctggcaacattggaagaaatgctagaaaagcttacggtcatcgttcaagatcgc
cgtgaagaagaagccagcacacagcaacaaaatgctgaacgtcaggccaaaattgatgcg
cttcgtgctcaacttcttgaggatggtatagatccgtctgaacttctcggcaccccttcg
gctaacaaatcaacaaaagccaaacgtgaacctcgtcctgccaaatacaaatatgttgat
gaaaatggcaatgaaaagttatggactggtcagggccgtactcctaaagcgattgctgcg
gcgcttgagaacggtaaaaagctggaagattttgagatctga

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