Pectobacterium parmentieri SCC3193: W5S_3092
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Entry
W5S_3092 CDS
T02514
Name
(GenBank) Succinate dehydrogenase iron-sulfur protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00020
Citrate cycle (TCA cycle)
pec00190
Oxidative phosphorylation
pec00650
Butanoate metabolism
pec00720
Other carbon fixation pathways
pec01100
Metabolic pathways
pec01110
Biosynthesis of secondary metabolites
pec01120
Microbial metabolism in diverse environments
pec01200
Carbon metabolism
Module
pec_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pec_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pec_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
W5S_3092
00650 Butanoate metabolism
W5S_3092
09102 Energy metabolism
00190 Oxidative phosphorylation
W5S_3092
00720 Other carbon fixation pathways
W5S_3092
Enzymes [BR:
pec01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
W5S_3092
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_18
Fer4_9
Fer4_16
Fer4
Motif
Other DBs
NCBI-ProteinID:
AFI91172
UniProt:
A0A0H3I6J7
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All DBs
Position
complement(3328415..3329131)
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AA seq
238 aa
AA seq
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MKLEFSIYRYNPDVDDAPRMQDYQLEAEEGRDMMLLDALMLLKEQDPTLSFRRSCREGVC
GSDGVNMNGKNGLACITPVSALQRGKSKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPY
LLNNGKNPPAREHLQSPEQRAKLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYR
FLIDSRDTETTPRLDDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLLHRSA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgaattttccatttatcgttacaacccggatgttgacgatgcgccgcggatg
caggattaccagttggaggcggaagaaggccgcgacatgatgctgctggatgcgctgatg
ctgctgaaagaacaagatccaacgctttcattccgtcgctcctgccgtgaaggtgtctgt
ggctccgacggcgttaacatgaacggcaaaaatggcttggcctgtattacgccggtttcc
gcgttacagcgcggaaagagcaaaattgttatccgtcctttaccgggattaccggttgtg
cgtgatttggtagtggacatgggacagttctatgctcaatatgagaaaataaagccttac
ctgttgaataatgggaaaaatccaccagcgcgtgagcatctgcaatcgcctgaacaacgt
gccaagctggatgggttgtatgaatgtattatgtgtgcatgctgttcaacgtcttgcccg
tcgttctggtggaacccagacaagtttgttgggcctgcggggctgctggctgcgtaccgt
ttcctgattgacagtcgtgatacggaaactacgccacggttggacgatctggacgatgca
tttagcgttttccgctgccacggtatcatgaactgcgtcagcgtctgtccgaaaggactg
aacccgactaaggctataggccatattaaatcgatgttactgcaccgcagcgcgtaa
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