Pectobacterium parmentieri SCC3193: W5S_3103
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Entry
W5S_3103 CDS
T02514
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pec03400
]
W5S_3103
Enzymes [BR:
pec01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
W5S_3103
DNA repair and recombination proteins [BR:
pec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
W5S_3103
Prokaryotic type
W5S_3103
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFI91183
UniProt:
A0A0H3IB83
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All DBs
Position
complement(3338404..3339882)
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AA seq
492 aa
AA seq
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MTTPVVTHVVWLRNDLRVTDNLALHAACQNPNATVLAVFIATPAQWKQHDMAPHQATFLL
DNLTLVQQALAEKGIPLHYHECADFAASVDWLVQFCAQQQATDLFYNHQYEINERLRDKQ
VKDRLTDSVVCHGYHDSLLLPPGSVLTGNGEMYKVFTPFRQAFIKRLLEADTMCVPAPDV
RGEPINNTVTFVPFSYPRVEVNNDDFPCGERAALQQLRRFCREQVQDYDQQRDFPAQPGT
SKLSPYLALGIVSPRQCFNRLRTECPEMLERREGGAFTWFNELVWREFYRHLIVSWPLLC
KHRPFTAWTQWVKWRESPEDLAAWQQGKTGYPIVDAAMRQLNETGWMHNRLRMICASFLV
KDLLIDWREGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPEG
RFIRHWLPELAIVPDKDIHQPHRWADKQHFKLNYPQPIVDHKTARQDTLAAFEAAKNIGM
ANNDREEKSKYA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcctgtcgttacacatgttgtctggctgcgcaatgacctgcgcgttaccgat
aatctggcgctacacgcagcttgtcagaatccgaatgcgaccgtgctggcggtattcatc
gcgacgcctgcgcagtggaagcagcatgatatggcaccgcatcaggcgacttttctgcta
gataacctgacgttggtacagcaggcgttagcggagaaaggcatcccgctgcattaccac
gaatgtgctgactttgcggcgtcggttgattggctagtgcagttctgtgcacagcagcag
gccaccgatcttttttacaaccatcagtatgaaatcaacgagcgcctgcgtgataagcag
gtgaaagatcggctgactgatagcgtggtttgccatggctatcacgacagcctgttgttg
ccaccgggtagcgtgctgacgggtaacggcgagatgtataaagtatttacgccattccgt
caggcctttatcaaacgcttgctggaggcggataccatgtgtgtacccgcaccggacgtg
cgcggtgagccgatcaataacacagtgacattcgtgccgttcagttatccgcgggttgag
gttaataacgacgatttcccctgcggcgaacgtgcggcattgcagcaactgcgacgcttt
tgccgcgagcaggtgcaggattatgatcaacagcgagatttcccggcgcagcccggcacc
agtaaactgtctccgtatctggcacttggaatcgtatcgccgcgtcaatgttttaaccgc
ctgcgtaccgaatgcccagagatgctggaacggcgcgaaggcggggcatttacctggttt
aacgagttagtctggcgtgaattttaccgccacctgatcgtttcctggccactgttgtgt
aagcaccgcccgttcaccgcgtggacgcagtgggtgaaatggcgggaatcgccggaggat
ttagcggcctggcagcaggggaaaactggctatccgattgtggatgcggcgatgcgtcaa
ctgaatgaaacggggtggatgcataatcgactgcgtatgatctgcgccagctttctcgtc
aaagatttactgatcgactggcgtgaaggcgagcgctactttatgtcacaactgctggat
ggcgatctggcagcgaataacggcggctggcagtgggcggcgtcaacgggcaccgatgcg
gcaccttattttcgtatttttaatccgacaacgcagggtgaacgtttcgatcctgaaggg
cggtttattcgccattggctacctgaactggctattgtgccggataaagacattcatcag
ccccatcgctgggccgacaaacaacattttaagctgaactatccgcagccaatcgttgac
cacaaaactgctcgtcaggatacgctggcggcgtttgaagcggcaaaaaacatcggcatg
gcgaataacgatcgagaagagaagagtaagtatgcgtaa
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