Pectobacterium parmentieri SCC3193: W5S_3163
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Entry
W5S_3163 CDS
T02514
Name
(GenBank) LysR family transcriptional regulator YbhD
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pec03000
]
W5S_3163
Transcription factors [BR:
pec03000
]
Prokaryotic type
Helix-turn-helix
LysR family
W5S_3163
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
EcoRI
Motif
Other DBs
NCBI-ProteinID:
AFI91237
UniProt:
A0A0H3I6S6
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Position
complement(3394568..3395467)
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AA seq
299 aa
AA seq
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MNLSIKQLRAFIALTETDNFTRAAQKINLSQPAFSSLIAGLEEEVGYRLFDRDTRKVQLN
ADGLHFIDIARRLVQTHDDAVGEIKSYATGYKGKIVLAVLPSMAVEWLPQVLTQYHRAYP
KIKVELLDTQWDRCLKAVLDGHADLALTAGQPSPGTFSSRMLFADSFYLICHNQHPLAQR
ANVDVVDVVQYPFVGFCKGTSIRQYTDQLIEPEGFNYVLEVRQLTTMMGLVAANYGVSIV
TGLTLFQFQHKDIAIIPFRDLSLQRGIYLVTDKERQLSVCAKEFYDFLLERAESFVPAT
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacttatcgataaaacaattacgggcctttatcgcgttgacagaaactgataatttc
acacgtgccgcccagaaaataaatctctctcagcctgcatttagttcattaattgccggg
ttagaggaagaggtcggctatcggttatttgaccgtgatacccgtaaagtgcaactcaat
gctgatgggctccatttcatcgatattgcccgtcgtctggtgcaaacccatgatgatgct
gtcggtgagatcaagtcttatgccaccggctataaagggaaaattgtgttggcggtactg
ccgtcaatggcggtggaatggttgcctcaggtattgacgcagtatcaccgggcttacccc
aagattaaggtcgagctgttggatacacagtgggatcgttgtctgaaagcggtgctggat
ggtcacgccgatctggcgctgacggcagggcagccatcgccgggaacgtttagctcccgc
atgctgttcgccgatagcttctatctgatctgccataaccagcacccgctggcacaacgc
gctaatgttgatgtggtggatgtggtgcagtatccgtttgttgggttttgcaaaggcacc
agtatccggcagtacaccgatcagcttatcgaaccggaaggctttaactacgtgctggaa
gtgcgtcagttgaccacaatgatggggctggtggcggcaaattatggtgtgagtattgtt
acggggctgacgctgttccagttccagcacaaagacattgcgattatcccgtttcgggat
ttatcgttgcagcgcggtatctatctggtgacggataaagaacgccagctttcggtgtgt
gcgaaagagttttatgattttcttctggaacgggcggaaagttttgttcccgctacgtga
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