Pectobacterium parmentieri SCC3193: W5S_3209
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Entry
W5S_3209 CDS
T02514
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pec03032
]
W5S_3209
03400 DNA repair and recombination proteins [BR:
pec03400
]
W5S_3209
Enzymes [BR:
pec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
W5S_3209
DNA replication proteins [BR:
pec03032
]
Prokaryotic type
DNA Topoisomerases
W5S_3209
DNA repair and recombination proteins [BR:
pec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
W5S_3209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Peptidase_M13_N
Motif
Other DBs
NCBI-ProteinID:
AFI91283
UniProt:
A0A0H3IBH9
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All DBs
Position
complement(3449974..3452613)
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AA seq
879 aa
AA seq
DB search
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCLAYIDDEDITLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARGEVETDAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE
VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSV
STMLERAGDDAARPEWLEPEFGIRDGHYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYKD
LLAEIAELLYILNSPERLMEVIREELEAIKTQYSDERRTEITANTADINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGRGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYEEGRHIFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAVRSMGRTATG
VRGINLQGEDRVVSLIIPRGEGDILTVTQNGFGKRTAVSEYPTKSRATKGVISIKVSERN
GKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDEHVVGLQRVA
EPVEDEELDGVVSVEGEIAEDDDAIDDIDGDDDIAEDDE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggtcaacattgaagaagagctgaaaagctcg
tatctggattatgcgatgtccgttattgtcggacgtgcattgccagatgttcgagatgga
ctgaaaccggtacaccgccgcgtactgtatgcgatgagcgtactgggtaacgactggaac
aaaccgtataaaaaatccgcccgtgtcgtcggggatgtcatcggtaaataccacccgcac
ggcgactctgccgtttatgaaaccatcgtgcgtatggcgcagcctttctcactgcgctac
atgctggttgatggtcagggtaacttcggttcgattgacggcgactccgctgcggccatg
cgatataccgaaattcgcatgtcgaaaattgctcacgaactgctggccgatctggaaaaa
gagacggtcgattttgtgccgaactatgacggcaccgagcagattcctgacgtcatgcct
acgcgtattcccaacctgctggttaacggttcttccggtatcgccgtcgggatggcaacc
aatattccgccgcataacctgactgaagtcgtgaacggctgtctggcgtatatcgacgat
gaagacattaccctcgaagggttgatggagcacatcaaaggcccggatttcccgacggcg
gcgatcatcaatggccgacgcggcattgaagaagcctatcgcaccgggcgcggtaaaatt
tacatccgcgcgcgtggcgaagttgaaacggacgcgaaaaccggacgtgaaaccatcatc
gtgcatgaaattccgtatcaggtgaacaaagcgcgcctgatcgagaaaattgccgaactg
gttaaagataaacgtattgaaggcattagcgcactgcgtgacgaatccgataaagacggt
atgcgtatcgtcatcgagattaagcgcgacgctgtgggcgaagtggtcctgaataatctg
tattcccagacgcagcttcagacgtcattcggcatcaacatggtggcactgcatcagggt
caaccgaagatcatgccgctgaaagatattctggttgcgtttgtgcgccaccgccgcgaa
gtggtgacgcgtcgtaccatttttgaactgcgtaaagcccgtgaccgcgcccatatcctg
gaaggtctggccattgcgctggcgaacatcgatccgattatcgaactgattcgtcgtgcg
gcgtcacctgctgaagcgaaagcttcactgatcgcacaagcgtgggaactgggcagcgtt
tctaccatgttggaacgtgcgggcgatgatgccgcgcgtccagagtggctggagccagag
ttcggcattcgtgacggtcactactacctgacggaacagcaggcgcaggcgattctggat
ctgcgtttgcagaaactgactggcatggagcacgaaaagctgctggatgaatataaagac
ctgctggcggagatcgccgagctgctttatatcctcaatagccctgagcgtctgatggaa
gtgatccgcgaagagctggaagcgatcaaaacgcaatacagcgacgagcgccgcacagaa
atcacggcgaacactgctgacatcaacatcgaagacctgattaatcaggaagatgttgtg
gttacgctgtctcaccagggttatgtgaagtatcagccgctgagcgactacgaagcccaa
cgtcgtggtggtcgtggtaaatcggcagcccgtattaaagaagaagactttatcgatcgt
ctgctggtggctaacacccacgacacgattctgtgcttctccagccgtggccgtctgtac
tggatgaaggtatatcaattgccggaagccagccgtggcgcacgtggtcgtccgatcgtt
aacctgctgccgcttgagccgaatgaacgtatcacggcgattctgccagtacgtgaatac
gaagaaggtcgtcatatcttcatggcaacggcgagcggtacggtgaagaaaacggcgctg
acggaattcagccgcccacgtagcgcggggatcatcgcggttaacctgaacgagggtgac
gagctgattggcgttgacctgactgatggtagtgatgaagcgatgctgttctcagcggaa
ggtaaagtagtccgcttctctgaacaggcggtgcgctctatgggccgaacggcaacgggc
gtccgtggtatcaacctgcaaggtgaagatcgcgtcgtttctctgatcattcctcgcggt
gagggcgatatcctgaccgtcacacaaaatggctttggtaagcgtactgccgtgagtgag
tatccaaccaagtcacgtgcgacgaaaggggttatctctatcaaggtcagcgagcgtaac
ggtaaagtggttggtgcggttcaggttgacgccgcagaccagatcatgatgatcaccgat
gcgggaacgctggtacgtactcgcgtgtctgaagtcagcatcgttggccgtaacacacag
ggtgtgacgctgattcgtacagcggaagacgaacatgttgttggcctgcagcgtgtggcc
gaaccggtagaagatgaagagctggatggcgtggtaagcgttgaaggcgaaatcgccgaa
gacgatgatgctatcgacgacattgatggcgatgatgatatcgctgaagatgacgaataa
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