KEGG   Pectobacterium parmentieri SCC3193: W5S_3258
Entry
W5S_3258          CDS       T02514                                 
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
pec  Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:pec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pec03032]
    W5S_3258
   03036 Chromosome and associated proteins [BR:pec03036]
    W5S_3258
   03400 DNA repair and recombination proteins [BR:pec03400]
    W5S_3258
DNA replication proteins [BR:pec03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    W5S_3258
Chromosome and associated proteins [BR:pec03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    W5S_3258
DNA repair and recombination proteins [BR:pec03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      W5S_3258
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: AFI91332
UniProt: A0A0H3I733
LinkDB
Position
complement(3506921..3507193)
AA seq 90 aa
MNKSQLIDKIAADADISKAAAGRVLDAIIGSVTESLKEGDDVALVGFGTFSVRERAARTG
RNPQTGKEISIPAAKVPGFRAGKTLKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaacaagtcacaattgatcgacaaaattgccgcagatgctgatatttccaaagcggca
gcagggcgtgtgttagatgcaattattggttccgttaccgaatccctgaaagaaggggat
gatgttgccttagttggttttggtactttctcagtgcgtgaacgtgctgcccgtaccggt
cgtaacccgcaaacgggtaaggaaatcagtatccctgcggcaaaagtaccaggattccgt
gctggtaaaacgctgaaagacgctgttaactga

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