Pectobacterium parmentieri SCC3193: W5S_3278
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Entry
W5S_3278 CDS
T02514
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00730
Thiamine metabolism
pec00900
Terpenoid backbone biosynthesis
pec01100
Metabolic pathways
pec01110
Biosynthesis of secondary metabolites
Module
pec_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
W5S_3278
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
W5S_3278
Enzymes [BR:
pec01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
W5S_3278
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
Transketolase_N
TPP_enzyme_C
GpA_nuclease
Motif
Other DBs
NCBI-ProteinID:
AFI91352
UniProt:
A0A0H3I759
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All DBs
Position
3529023..3530888
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AA seq
621 aa
AA seq
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MSFDTAKYPTLALVETPDELRLLPKESLPKLCDELRQYLLDSVSRSSGHFASGLGTVELT
VALHYIYNTPFDHLVWDVGHQAYPHKILTGRRDRISTIRQKGGLHPFPWRDESEYDVLSV
GHSSTSISAGLGMAVAAEREGRGRRTVCVIGDGAITAGMAFEAMNHAGDIKSDLLVVLND
NEMSISENVGALNNHLAQLLSGKLYASLREGGKKVLSGLPPIKELVKRTEEHLKGMVVPG
TLFEELGFNYIGPVDGHDVQALAHTLKNMRNLKGPQLLHIMTKKGKGYAPAEQDPISWHA
VPKFDPASGTLPKSKEGAQPTYSKIFGQWLQETAAKDSKLMAVTPAMREGSGMVQFSRDY
PQQYFDVAIAEQHAVTFAAGLAVGGYHPVVAIYSTFLQRAYDQVIHDVAIQNLPVLFAID
RGGIVGADGQTHQGAFDLSFLRCIPNMVIMTPSDENECRQMLHTGYHYQKGPTAVRYPRG
NGTGTELTPLSELPIGKGMVRRQGETIAILNFGTLLPEAQIAAEKLNATLVDMRFVKPLD
EALLEELAQSHSTFVTLEENAVMGGAGSGVNEFLMAKRLAVSVLNIGLPDIFIPQGSQEE
IRADLGLDAAGIERNIIQWMK
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgataccgcgaagtaccctacattggcgttagtggaaacaccggatgaactt
cgattgttaccgaaagagagcctgccaaaactgtgcgatgagctgcgccaatacctgttg
gacagcgtcagccgttcaagcggacattttgcttcagggttagggacggttgaattaacg
gttgcactgcattacatctataacacgccttttgatcatctggtgtgggatgttggtcat
caggcttatccgcataagatcctgacgggccgtcgcgatcgtatttcaacaatccgccaa
aaaggcggtttgcaccccttcccgtggcgtgatgaaagcgaatatgacgtattaagcgtc
ggacattcctccacctcaatcagtgccgggttgggtatggccgtcgcggccgagcgtgaa
ggtagaggtcgccgtaccgtttgtgtgatcggcgacggcgcgattactgcgggtatggcc
tttgaggcgatgaaccacgcaggcgacatcaaatccgatctgcttgttgtactgaacgac
aatgaaatgtcgatttcggaaaacgtcggcgcattgaacaaccatctagcacaactatta
tccggcaagctctacgccagcctgcgtgaaggcggtaaaaaagttttatccggcctgcct
cccatcaaagagttagtgaagcgcaccgaagaacatcttaaaggcatggttgtaccgggc
acactatttgaagagctgggctttaattatattggcccagtcgatggtcatgacgttcag
gcgctggcgcatacgctgaagaacatgcgtaatctgaaaggcccgcagcttttgcacatc
atgacgaagaaaggcaaaggttacgcgcctgccgagcaggatccaatcagttggcacgcg
gtgccaaaatttgatcccgccagcggcacattgccaaaaagcaaagaaggtgcccaaccc
acctattccaagatctttggtcaatggttacaggaaaccgccgccaaagacagcaagctc
atggcagtcacaccagcgatgcgcgaaggttccggcatggtgcaattttcgcgcgactat
ccgcaacaatattttgacgtagcgattgccgaacagcatgctgtcacgtttgctgctggc
ctggcagtcggtggttatcatcccgtcgtcgcgatttactcaactttcctgcaacgtgct
tacgatcaggttatccacgatgtagcgattcagaatctaccggttctttttgctatcgat
cgcggtggtattgttggtgccgatgggcaaacgcatcaaggcgcgttcgatctctctttc
ttacgctgtatcccgaatatggtcatcatgacgcccagcgatgaaaatgaatgtcgtcag
atgttgcacactggctatcactaccaaaaaggccctaccgcggtacgctacccgcgtgga
aacggtacgggtacggaactgacgccattatcagaactgccaatcggcaaaggtatggtg
cgtcgtcagggtgaaacaatcgctattctgaattttggtacgctattaccggaagcgcag
attgcggctgagaagttgaacgccacactcgtcgacatgcgttttgtgaaaccgctggat
gaagcattacttgaagagctggcacagtctcacagcacattcgtgacgctggaagagaat
gctgtcatgggcggtgccgggagcggtgtgaatgaatttctgatggcgaaacgccttgcc
gtctcagtgctaaacattgggctaccggatatatttattccgcaaggttcgcaggaagaa
atccgtgccgatctcggtctggatgccgctggcattgagcgcaacatcatacagtggatg
aaataa
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