Pectobacterium parmentieri SCC3193: W5S_3299
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Entry
W5S_3299 CDS
T02514
Name
(GenBank) Nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pec03400
]
W5S_3299
DNA repair and recombination proteins [BR:
pec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
W5S_3299
Archaeal homologous recombinant proteins
W5S_3299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AFI91373
UniProt:
A0A0H3IBQ3
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Position
3552502..3553728
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AA seq
408 aa
AA seq
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MRIIHTADWHLGQYFYTKSRAAEHQAFLHWLIIQVEQHHVDAIIVAGDIFDNGSPPSYAR
EMYYSFVVELQHTGCQLIILGGNHDSVATLNESRDLLACLNTRVIACASDDPAQQVLLLE
NRQQQPGALLCAIPYLRPRDVLTSKAGQSGDEKQLALQEAITAHYQQCYQLACQKRDELG
LPLPIIATGHLTTIGVTASESVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQRVTKSDH
IRYSGSPIPLSFDELGSEKSVCLVSFIPDAPPKIDTLPIPVTQPMQLIKGSLSDIEQQLT
TFQNYQGDKPVWLDIELNTQDYLSDMQKRIQAMTEHLHVEVLLLRRTREQRLQAITRQDK
ETLNELSVHDVFERRLATEKDMEDGRQQRVRTLFNQVINELENSEPAK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattatccacaccgccgattggcatttagggcaatatttttataccaaaagtcgc
gccgctgaacatcaggcgtttcttcactggttgatcattcaggtagagcaacatcacgtc
gatgccattatcgtagctggcgatatcttcgataacggctcgccccccagctatgcgcgt
gaaatgtattatagctttgtagtagaactacagcacacaggctgccagctcatcattctt
ggcggcaaccacgactctgtcgccacgctgaacgagtcgcgagatttgctggcctgtctg
aacacgcgggtgattgcctgcgccagcgacgatcccgcccagcaagtgcttctgctggaa
aaccgccagcagcagcccggtgccctactctgcgccattccctatttgcgcccacgtgat
gtgctaaccagcaaagccggacaatccggtgatgaaaaacagctagcactacaggaagcg
attaccgcgcattaccagcagtgttatcaactggcttgccagaagcgagacgagcttggt
ctgccgctaccgattattgcaaccgggcatctgacgacgattggcgtaaccgcctcggaa
tccgtgcgcgatatctatattggcacgctcgatgctttccctgctcaggctttcccgcct
gcggattatatcgctttggggcatattcaccgcccgcagcgcgtgactaaaagtgatcac
attcgctatagcggctccccaatcccactgagttttgatgaactcggcagcgaaaaatcc
gtttgtctggtcagctttatacccgatgcaccgccgaagatagacacgctgcctattccc
gtgactcaaccgatgcagttgattaaaggcagcctgagcgatattgaacagcaactgacc
accttccagaactatcagggcgataaacccgtgtggttggatatcgagctcaacacgcag
gattatctgagcgacatgcaaaaacgcattcaggcgatgacagaacacctgcacgttgag
gtactcctgctacgccgcacgcgcgaacagcgtttgcaggctattacccggcaggacaag
gaaacgctgaacgaattgagcgtacatgacgtttttgaacgtcgtctggcaacggaaaaa
gacatggaagacggtcgccagcagcgcgttcgcacgctgtttaatcaggttattaatgaa
ctagaaaatagcgaacctgccaaatga
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