Pectobacterium parmentieri SCC3193: W5S_3318
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Entry
W5S_3318 CDS
T02514
Name
(GenBank) Polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00040
Pentose and glucuronate interconversions
pec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
W5S_3318
Enzymes [BR:
pec01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
W5S_3318
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
AFI91392
UniProt:
P26509
Structure
PDB
PDBj
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All DBs
Position
complement(3591346..3592554)
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AA seq
402 aa
AA seq
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MEYQSGKRVLSLSLGLIGLFSASAWASDSRTVSEPKTPSSCTTLKADSSTATSTIQKALN
NCDQGKAVRLSAGSTSVFLSGPLSLPSGVSLLIDKGVTLRAVNNAKSFENAPSSCGVVDK
NGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLI
QINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITI
AYSNIATGDDNVAIKAYKGRAETRNISILHNDFGTGHGMSIGSETMGVYNVTVDDLKMNG
TTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGSNVPDWSDITFKDVT
SETKGVVVLNGENAKKPIEVTMKNVKLTSDSTWQIKNVNVKK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcaatcaggcaagcgcgttttatcattatcactgggtcttatcggcttgttt
agcgcatcggcatgggcttctgactcacgaacggtgagtgaaccgaaaacaccatcctct
tgtacgacgcttaaagcggacagcagcacggcaaccagtacgattcaaaaagcgctgaat
aattgcgatcaaggaaaagccgtaaggttgagcgcagggagtacctctgtctttctgagc
ggtccactctctctgccttcaggtgttagcctattaatcgacaaaggggtgaccctacgc
gctgtgaataacgccaagtcttttgagaatgcgccttcatcctgtggtgtggtcgataaa
aatggtaaaggctgtgatgcgtttattactgccgtgagtacgacaaatagcggaatctat
gggccgggcacgattgatgggcagggcggcgtaaagcttcaggataaaaaggtgagctgg
tgggaactggctgccgatgccaaagtgaaaaagttaaaacagaatactcctcggctgatt
cagattaataagagtaagaattttacgctgtataacgtttccttaatcaattccccgaac
ttccacgtcgtctttagcgacggtgatgggtttaccgcgtggaaaaccacgattaaaacg
ccgtccaccgccagaaacacggacggtatcgatccgatgtcgtcaaaaaatatcactatt
gcctacagcaatattgcaacgggcgacgataacgtcgcgatcaaagcgtataaaggtcgg
gcggaaacgcgcaatatctcgatcctccataacgatttcggtactggacatggtatgtcg
atcggcagtgaaaccatgggcgtttataatgtcacggtcgatgatttgaagatgaacggc
acgaccaacggtttgcgcatcaaaagcgataaatcggctgccggggtggtcaatggtgtt
cgatatagtaatgtcgtgatgaagaatgtcgcgaaaccgatcgtgattgatacggtatat
gagaaaaaagaagggagtaatgtcccagactggagtgatatcacgtttaaggacgtgacg
tctgaaaccaagggagtcgtggtactgaacggtgagaatgctaaaaaaccgatagaggtg
acgatgaagaatgtcaaactgaccagcgacagcacatggcaaatcaagaacgtcaacgtc
aagaagtag
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