Pectobacterium parmentieri SCC3193: W5S_3409
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Entry
W5S_3409 CDS
T02514
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
W5S_3409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pec03400
]
W5S_3409
Enzymes [BR:
pec01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
W5S_3409
DNA repair and recombination proteins [BR:
pec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
W5S_3409
Prokaryotic type
W5S_3409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
DUF6308
Motif
Other DBs
NCBI-ProteinID:
AFI91480
UniProt:
A0A0H3I673
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All DBs
Position
3689224..3690330
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AA seq
368 aa
AA seq
DB search
MMQAQQFAHQVLDWYQRYGRKTLPWQLEKTPYKVWLSEVMLQQTQVTTVIPYFQRFMARF
PNVNALAAAPLDEVLHLWTGLGYYARARNLHKAAQTIVSRHGGDFPTTFDEVAALPGVGR
STAGAVLSLSLGQHFPILDGNVKRVLARCYAVDGWPGKKEVEKKLWARSEDVTPAEGVSQ
FNQAMMDLGAMVCTRSRPKCELCPLNTGCIAYANHSWAQYPGKKPKQTLPEKTGWFLLMQ
QDSQVWLQQRPTVGLWGGLFCFPQFSERQELELWLQQRGLNPDGLQQLVAFRHTFSHFHL
DIVPLWLNVSQDDRSQNRSCMDDGAGLWYNLAQPPSVGLAAPVERLLRELAHPQSTRLNA
CAIDEEEA
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagcgcaacagttcgcccatcaggtgctggactggtatcaacgctatggccgc
aaaaccctgccatggcagcttgagaaaacgccctataaagtatggctatccgaagtgatg
ctgcaacaaacgcaggtcaccacggttattccttatttccaacgctttatggcacgcttt
cccaacgtgaacgcactggcggcagcaccgctggatgaagtgctccacttatggactggg
ctgggctactacgcccgtgcgcgtaatctacacaaagccgcgcagaccattgtgtcgcgc
cacggcggtgatttccccaccacctttgatgaagtcgcggcgttaccgggcgtcgggcgc
tctaccgcaggcgcggtgttgtcgctctctctcggccagcatttcccgatccttgacggc
aacgtgaagcgcgtgctggcacgctgctacgccgttgacggctggccgggcaagaaagaa
gtcgaaaagaaactgtgggcgcgcagtgaggatgtgacacccgccgaaggcgtcagccag
tttaatcaggcgatgatggacctcggtgcgatggtttgcacccgcagtcgccccaagtgc
gaactgtgccctctgaacaccggctgcattgcttacgctaaccacagttgggcgcaatat
cccggtaagaaaccgaagcagacactgccggaaaaaacgggctggttcctgctgatgcaa
caggactctcaggtctggctgcaacagcgccctaccgtgggcctgtggggtgggctattt
tgcttcccacagttcagtgaacgtcaggaattggaactctggctgcaacaacgcggtctg
aatcctgatggattgcaacagcttgtcgcgttccgccacacattcagccattttcatctg
gatattgttccgctctggctgaacgtatcgcaggacgatcgttcacaaaacaggtcctgc
atggatgacggtgcgggtctctggtataacttagcgcagccgccgtctgtcggactggcc
gccccggtagaacgcctactgagggaactggctcacccacagtcaacacgtttaaatgcc
tgcgcaattgatgaggaagaagcatga
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