Pectobacterium parmentieri SCC3193: W5S_3420
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Entry
W5S_3420 CDS
T02514
Name
(GenBank) Ornithine decarboxylase, inducible
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00330
Arginine and proline metabolism
pec00480
Glutathione metabolism
pec01100
Metabolic pathways
pec01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
W5S_3420
09106 Metabolism of other amino acids
00480 Glutathione metabolism
W5S_3420
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
W5S_3420
Enzymes [BR:
pec01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
W5S_3420
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AFI91491
UniProt:
A0A0H3I9A9
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Position
complement(3700336..3702489)
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AA seq
717 aa
AA seq
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MKQLKIAANAAVATRLITTREIVALSQTDFTDVAAVVVSIEEARSGILSILQHTGFSIPA
FVEEPDEDKESDVLPAGSEWLILDDEGEHASVLERAAKAYQDALLPPFFDTLTKYVKMKN
TTFACPGHQGGQFFRKHPAGRQFFEFYGENVFRSDICNADVKLGDLLIHEGAAKKAQKHA
ARVFNADKTYFVLNGTSSANKVVTNALLARGDLVLFDRNNHKSNHHGALIQAGATPVYLE
TVRNPFGFIGGVDAHCFDEAYLRKLIAEVAPERANEQRPFRLAVIQLGTYDGTIYNARQV
VDSIGHLCDYILFDSAWVGYEQFIPMMEQCSPLLLDLNENDPGIFVTQSVHKQQAGFSQT
SQIHKKDTHIKGQRRFCNHKQLNNAFMLHASTSPFYPLFAALDVNAKMHEGASGRRMWMD
CVKLGIEARKQLLTRCSLIKPFVPVTVGGALWQDHDTETIAQDVRFFNFEPGEKWHAFEG
YAEDQYFIDPCKLLLTTPGIDAISGDYTEFGIPATILANYLREHGIIPEKCDMNSILFLL
TPAEDAVKMQELVNALVHFETLIARDAPLSEVLPSLYQKYKERYRGYRLRRLCQEMHDFY
AQHNVKDLQKAMFRKTEFPSVVMLPQDANREFVRGNIELIPIDEAEGRIAAEGALPYPPG
VLCVVPGESWGGAVQRYFLALEDGINLLPGFSPELQGVYSVAEEDGSKRLYGYVVEK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttaaaaattgcggcaaatgcagcggttgccacccgtttaatcacaacgcgc
gagattgtcgcgttgagtcagactgacttcaccgatgtggcggcagttgtcgtctctatt
gaagaagcccgtagcggtattttatcgatattgcagcacaccggttttagcattccggcg
tttgtcgaagagcctgatgaagataaagagtcagatgttctgcctgcgggcagcgaatgg
ctgattctcgatgatgaaggtgagcatgccagcgtgctggaacgtgcggcgaaagcctat
caggatgcgctgctgccgccgtttttcgatacgctgaccaagtacgtcaaaatgaaaaat
acgacgtttgcctgccccggacatcagggcggtcagttctttcgtaagcatccggcaggg
cgccagttttttgagttttacggtgagaacgttttccgttcggatatctgtaacgctgac
gtcaaactgggtgatttgctgattcatgaaggggcggcgaagaaggcacagaagcacgct
gcgcgggtatttaacgctgataaaacctattttgtgttgaacggcacctcctctgcgaac
aaagtggtgacgaacgcgctgctggcgcgtggcgatctggtgctgtttgaccgtaacaac
cataaatccaaccatcacggtgcgctgattcaggcgggggcaacgccggtctatctggaa
actgtgcgcaatccgttcggctttatcggcggtgtggatgcgcactgttttgatgaagcc
tatctgcgtaagctgattgcggaagtggcgccggaacgtgccaacgagcaacgtccgttc
cgtctcgcggtgatccaactcggcacctatgacggcacgatttataacgcacgtcaggtc
gtcgatagcattgggcacctgtgtgactacatcctgtttgactcggcctgggttggttac
gagcaatttatcccgatgatggaacagtgctcgccgctgttgctggatctgaacgaaaac
gatccgggtatcttcgtcacccagtcggtgcataagcagcaggcgggcttctcccaaact
tcgcagatccacaaaaaagatacgcatatcaaagggcagcgtcgtttctgtaaccataag
caactgaataacgcctttatgctgcatgcgtcgaccagcccgttttacccactgttcgcc
gcgttggatgttaatgccaaaatgcacgaaggggccagcgggcgtcgtatgtggatggat
tgcgtgaagctgggcattgaagcgcgtaagcaactgttgacgcgctgttcgctcatcaaa
ccgttcgtacccgtaacggtgggcggtgcgctctggcaggatcacgatacggaaacgatc
gcgcaggacgtgcgtttcttcaattttgagccgggcgagaaatggcacgcgtttgaagga
tacgcagaggatcagtattttatcgatccctgcaaattgttgctgactacgccgggtatt
gatgcgattagcggcgattacaccgaatttggtattccggcgacgatccttgccaactat
ctgcgtgagcatggaattatccctgaaaaatgcgatatgaactcgattctgttcctgcta
acgccagcggaagacgctgtaaaaatgcaggagctggttaacgcgctggttcattttgaa
acgctgattgcccgcgatgcgccgctgagtgaagtgctgcccagcctgtatcagaaatac
aaagagcgttaccgtggttaccgactgcgtcggttgtgccaggaaatgcatgatttttac
gcccagcacaatgtgaaagatctgcaaaaagcgatgttccgcaaaaccgagtttccgtcc
gtggtgatgttgccacaggatgccaacagggaatttgtacgcgggaatattgagcttatt
cctatcgatgaagcggaaggacgtatcgcggcagaaggggcattgccgtatccaccgggc
gtactgtgtgtggtgccaggggaaagctggggtggggcggtacagcgttattttctggcg
ttggaagatgggattaacctgctgcccggtttttcaccggaattgcagggggtttacagc
gttgcggaagaagatggcagcaaacggctgtacggctacgtagtagaaaaataa
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