Pectobacterium parmentieri SCC3193: W5S_3540
Help
Entry
W5S_3540 CDS
T02514
Name
(GenBank) Putative Type IV pilus protein
Organism
pec
Pectobacterium parmentieri SCC3193
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TcpQ
Motif
Other DBs
NCBI-ProteinID:
AFI91610
UniProt:
A0A0H3I6K0
LinkDB
All DBs
Position
complement(3805794..3807122)
Genome browser
AA seq
442 aa
AA seq
DB search
MTTRLIRPPRNTPTLACLSAAAMLVAGCAQQTTTSSVSRQNVSPRVNDIYQNRSPEVVRY
DRYTLVSTRPADSQRDPLNQMIDITMPQQLVRSVGDGFRYLLLESGYSLCPSSSSMFTEL
LSRPLPGVQRSIGPVRLSEALQIVAGPAWRLRVDDVNREVCFVLRDEYRSFAPAASVALS
TVPAKPAISTSPKTSGNPFANPGAQTKSGMLKPDSQPLPVPTLTTLSPTATESKPSVLVT
EAPVVNKPIASAAISKPSTAAQTTPLSAPKSSVAPVPVAKPSPAPTTALPPAPVAQPPKK
EETTTLLSTPSKTIPAVAATVVPAPVASPAVASEPKPAPVITPVWKADPDTTTLREFLTR
KASSVDCPYGGKWAVVWPINVDYPLPPRLVIHGSFDAFVNRIFYLYGPERVDGKVDTPLY
GLANRSQCVVVVSDKPLKTGLK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaagacttatacggccccctcgaaataccccaacgctggcatgcctttctgct
gctgcaatgttggtagcggggtgtgctcaacagacaacgacgtcctcagtttcccgtcag
aacgtctcccctagagtgaacgacatttatcaaaatcgctcacctgaagtcgtgcgctat
gaccgttacacactggtcagcactcgccctgcagattcacaacgcgatcccctcaaccaa
atgatcgacatcacgatgccgcagcaactggtgcgtagcgtcggtgatggatttcgttat
ttgctgcttgaatcggggtattcattatgtcccagcagttcctcgatgttcactgaactg
ttgagtcgccccttacctggtgtacagcgctcaattggccccgttcggttaagtgaggca
ttacagatagtggcggggcccgcgtggcggttacgtgttgacgatgtgaatcgtgaagtt
tgctttgttctgcgtgatgaatatcgttcgtttgcgccagccgcctccgttgcattgtct
accgtacctgctaaaccggccatttcaacgtcgccgaagacttccggaaacccttttgct
aacccaggggcgcagacgaaatcaggcatgttaaaacctgacagccaacccttacctgta
ccaaccctgacaacgctttcgccgacagcgacagagagtaaaccttctgtattggttacg
gaggcacctgttgtgaacaagccaatcgcttctgccgccatatcgaaaccttctactgcc
gcccaaacaactccgttgtctgcaccgaaatcctcagtcgctccagtcccagttgcaaaa
ccatccccagcaccgacgacagcattgccgccggctcctgtcgcgcagccgccgaaaaaa
gaggaaacgacaacgctgctttcgacgccgtcgaaaacaatcccggcagtcgctgcaact
gtggttcctgcgccagtcgcttctcccgctgtggcttctgaacccaagccagcacctgtt
attactcccgtctggaaagccgatcccgacaccactacgttacgtgagtttttgacgcga
aaggcttcctcagtcgattgcccctatggcggaaaatgggctgtggtttggccgatcaat
gttgattacccgctgcctcctcgcctggttatccatggcagtttcgatgcatttgtgaat
cgcattttttatttatatggaccagaaagggttgatgggaaggtcgataccccgctctat
ggtctcgctaatcgcagtcagtgtgtcgtggtggtctctgataaacctcttaaaacaggg
ctgaagtaa
DBGET
integrated database retrieval system
