Pectobacterium parmentieri SCC3193: W5S_3649
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Entry
W5S_3649 CDS
T02514
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pec03016
]
W5S_3649
Enzymes [BR:
pec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
W5S_3649
Transfer RNA biogenesis [BR:
pec03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
W5S_3649
Prokaryotic type
W5S_3649
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AFI91712
UniProt:
A0A0H3I934
LinkDB
All DBs
Position
complement(3916973..3918019)
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AA seq
348 aa
AA seq
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MENSEQLVWLHGEPQATGSLKSTAEDFLVVEDLGFLPDGDGEQVLVRVRKRGCNTQFVAE
MLAKFTRLPLRAVSYAGLKDRHAVTEQWFCLHMPGKETPDFSPLELEGCDVLEVTRHRRK
LRIGALRGNHFTLVLRQVSDRHEVDARLALIATNGVPNYFGSQRFGRNGNNLEQARLWAN
NEIRVKERSKRSFYLSASRSAMFNQVASTRLAQQQAKTVLCGDALQLTGRGSWFVAKPDE
LDALQVRLDAGELQITAPLPGDGELGTQDDARLFEDLALTGQETLWSLVKRERVEPARRA
VLLYPQQMQWEWQDDTTVEVKFWLPAGSFATSVVRELLHSQQDTDIGA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatagcgaacaactcgtctggctgcacggtgaaccacaggctactggctcattg
aaatccactgcggaagattttctggtagtggaagatctggggtttctgcccgatggtgat
ggtgaacaggttttggtacgcgtacgcaagcgcggctgcaatacgcaatttgtggctgag
atgctggcaaaatttactcgcctgccgctgcgtgctgtcagctacgctggcctgaaagat
cgccacgctgtcaccgagcagtggttttgcctgcacatgccgggaaaggagacgcccgat
ttctccccgctggagttggaaggctgtgacgtgcttgaggtgacccgccaccgccgcaaa
ttgcgcatcggtgcgctacggggtaaccattttaccttagtgttgcgccaggtgagcgat
cgacacgaggtggacgcgcgtttggcgctgattgcgactaacggtgtccctaattatttc
ggtagccagcgttttgggcgcaacgggaataatcttgaacaggcgcgtctttgggccaat
aacgaaattcgggtaaaagaacgcagtaaacgtagcttttatctttctgccagccgcagt
gcgatgtttaatcaggttgccagtacgcgactggcgcagcagcaagcgaaaaccgttttg
tgtggtgatgcattgcagctaacggggcgcggcagttggtttgttgccaaacctgacgaa
ctggatgccttacaggtgcgtcttgacgccggcgaactccagattactgcaccgctgccc
ggcgatggtgaactgggcacgcaggatgacgcgcggctatttgaagatctggccttgacc
ggacaggaaacattatggtctttggtcaaacgtgagcgggttgaaccagcccggcgtgct
gtgctgctatatccgcagcaaatgcagtgggaatggcaggatgatacaaccgtagaagtg
aaattctggctacctgcgggaagctttgcgaccagtgtagtgcgtgaattactgcattca
cagcaggataccgatattggtgcctga
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