Pectobacterium parmentieri SCC3193: W5S_3772
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Entry
W5S_3772 CDS
T02514
Name
(GenBank) TIM-barrel protein, yjbN family
KO
K05539
tRNA-dihydrouridine synthase A [EC:1.-.-.-]
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pec03016
]
W5S_3772
Transfer RNA biogenesis [BR:
pec03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
W5S_3772
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Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
AFI91835
UniProt:
A0A0H3I786
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All DBs
Position
4060433..4061455
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AA seq
340 aa
AA seq
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MTDVKSDKSNTVSADSRASSLNRFSVAPMLDWTDRHCRYFLRQLTSQTLLYTEMVTTGAI
LHGKGDYLAYSEDEHPLALQLGGSDPTALAQCAKLAEQRGYDEINLNVGCPSDRVQNGRF
GACLMGEAALVADCIKAMKDSTSIPITVKTRIGIDDQDSYEFLCEFIQTVAGRGECDTFI
IHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPALTIAINGGVKTLEEAKTHLQHLDG
VMMGREAYQNPGILAQVDRELFGIDAVAPDLAGVVRAMYPYIERELSGGASLGHITRHML
GMFQGITGARQWRRYLSENAHKPGADAAVVERALTLVNLV
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtaaaatcagataaaagcaacacggtatccgccgactcccgcgcctctagt
cttaaccgcttctccgtcgcgccgatgctcgactggaccgatcgtcattgccgttatttt
ctccgccagttgactagccagacgctgttgtataccgaaatggtgacaacaggcgcgatt
cttcacggtaaaggcgactatctggcctacagcgaagacgaacatccactggcgctgcag
ctcggcggcagcgatcctactgcattggctcaatgcgccaaactggcagagcagcgcggc
tatgatgaaatcaatctgaacgtcggttgcccgtcagaccgtgtacaaaatggccgtttc
ggcgcctgcctgatgggcgaagccgcgctggtagcagactgcatcaaggcaatgaaagac
agcacctcaatcccgattacggtgaaaacccgcatcggcattgacgatcaagacagctat
gaattcttgtgcgagtttatccaaaccgttgcagggcgcggcgagtgcgataccttcatc
atccacgcgcgcaaagcctggctatcgggccttagcccgaaagagaatcgggaaattcca
ccgctggattatccgcgcgtttatcagctcaaacgtgatttcccagcactgactatcgct
atcaacggcggcgttaaaacgctggaagaagccaaaacgcatttacaacatctggacggc
gtgatgatggggcgtgaggcttaccaaaaccccggtattctggcgcaggttgaccgtgaa
ctgtttggtattgatgccgttgctccggatctggctggcgtcgtgcgagccatgtatccc
tacatcgaacgcgaactttctggcggtgcgtcattaggccacattacacgccatatgctc
ggcatgtttcaaggcatcaccggtgctcgtcagtggcgacgctacctcagcgaaaacgcc
cacaagcccggtgccgacgctgcggtagtagaacgtgcgttgacgctggttaatctggtt
taa
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