Pectobacterium parmentieri SCC3193: W5S_3846
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Entry
W5S_3846 CDS
T02514
Name
(GenBank) Dihydrodipicolinate synthase
KO
K22397
2-dehydro-3-deoxy-D-pentonate aldolase [EC:
4.1.2.28
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00040
Pentose and glucuronate interconversions
pec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
W5S_3846
Enzymes [BR:
pec01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.28 2-dehydro-3-deoxy-D-pentonate aldolase
W5S_3846
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Gene cluster
GFIT
Motif
Pfam:
DHDPS
Asp_Glu_race
Calmod_bind_C
YbjQ_1
Motif
Other DBs
NCBI-ProteinID:
AFI91909
UniProt:
A0A0H3ICW6
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All DBs
Position
complement(4139018..4139935)
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AA seq
305 aa
AA seq
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MGFITKFAGIIPPVSSIFTSDGLLDEAGMQRVIDSLIAAGVNGLFFLGTGGEFSQMSATE
RMALTEAVIRMVDCRVPVLIGVGSTNTREAVALSQHAETAGADAVVAINPYYWQITEENL
MGYYGAIATAVSLPVILYNFPKLTGQDLYPALVKRLADAHHNIVGIKDTIDSVAHLRDMI
TTVKAAHPDFAVFCGFDDHLLNTVLMGGDGAISASANFVPELSVGIYQALRNGEFAEAMD
MHKTILQLPRLYQIDSPFVNVVKEAMTLMGLDISTACLAPTQPLNNEQKAQVRQTLVDAG
VLSEK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgggatttatcaccaagttcgccgggatcattccgccagtgtcgtcaatctttacgagt
gacggccttctggatgaagcaggaatgcaacgcgtgattgacagcctgatcgccgcaggc
gtgaatgggctatttttcctcggtacaggaggggaattttcgcaaatgtctgcgacagag
cgtatggcattgaccgaggctgtgattcgtatggtggattgccgtgttccggtattgatt
ggcgtaggcagtacaaacacgcgtgaagccgtcgcgctgagtcaacatgctgagaccgct
ggtgcagatgcggttgtcgctattaacccctattactggcaaattaccgaagagaacttg
atgggctattacggcgccatcgccaccgctgtctcgctcccggtgattttgtacaatttc
cccaagctcaccggtcaggatctctatcccgctctcgtgaaacgtctggccgatgcacat
cacaacattgtcggtatcaaagacaccatcgattctgtggcgcatttgcgcgatatgatc
accacggtgaaggccgcccatcctgatttcgcggtgttctgtggttttgacgatcactta
ttgaatacggtgttgatggggggagacggggcaatctccgccagtgccaattttgtacct
gaactgtcggtcggtatctatcaggcgctgcgcaatggggaattcgctgaggcgatggac
atgcataaaacgattttgcaattgccgcgtctctatcaaattgacagtccatttgtgaat
gtcgtgaaagaagcaatgacgctaatggggctggatatttccacggcctgtttagcgccg
acacagccattaaataacgagcagaaagcacaggttcggcaaacgctcgttgatgcgggc
gtattatcagaaaaataa
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