Pectobacterium parmentieri SCC3193: W5S_3934
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Entry
W5S_3934 CDS
T02514
Name
(GenBank) Putative long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00061
Fatty acid biosynthesis
pec00071
Fatty acid degradation
pec01100
Metabolic pathways
pec01212
Fatty acid metabolism
pec02024
Quorum sensing
pec04146
Peroxisome
Module
pec_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
W5S_3934
00071 Fatty acid degradation
W5S_3934
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
W5S_3934
09145 Cellular community - prokaryotes
02024 Quorum sensing
W5S_3934
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pec01004
]
W5S_3934
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pec04147
]
W5S_3934
Enzymes [BR:
pec01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
W5S_3934
Lipid biosynthesis proteins [BR:
pec01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
W5S_3934
Exosome [BR:
pec04147
]
Exosomal proteins
Exosomal proteins of breast milk
W5S_3934
Exosomal proteins of breast cancer cells
W5S_3934
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AFI91997
UniProt:
A0A0H3IA04
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All DBs
Position
complement(4246796..4248601)
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AA seq
601 aa
AA seq
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MTNHLQPYHVVHRVQDRINHCAGRIALREWTPAGEQQLTWTQAGQRIQRIASALLAQGVD
VQERVAIFSHNSMNWSLADLALLHLRAISVPIYATNTAAQAAFIINDADIRTIFVGGQEQ
LDALLTLRDTCPQLRNIIVMDEGVNLHGSDIAQSLHEFEAQAVDDFWRDEWQQRIDSRDL
NDLFTLIYTSGTTGEPKGVMLDYTNMAMQLKLHDERLSMSENDISLSFLPLSHVFERAWS
FFVMHCGAQNVYLSDTNLVRGAMQAVKPTVMCAVPRFYEKVYSAIHEKVAQAPWYRQRLF
DWAVTQGQHVFLAKQAAKKGGLLRRIMHHYADRLVLGKLRQLLGGEIRFMPAAGARLDDN
IILFFRSIGIRIIYGYGMTETCATVSCWEENRFRLGSIGTPLPGIEVRIGEEKEILVRGA
TLMRGYFHRPQETADAFTADGWLKTGDAGELDANGNLFITERLKDLMKTSGGKYIAPQHL
EGTLGQDRFIEQVAIIADTRKYVSALIVPCFEALEEYAHSINLKYHDRLELLRHSHIIEL
FEQRLREMQKELSRVEQVKKFTLLPVPFSMAEGELTPTLKLRRKIINQRYQLEIDAMYAE
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgactaatcatttacagccataccatgtggtgcaccgggttcaagatcggatcaatcac
tgcgcaggtcgtattgcgttgcgcgagtggacgcctgcgggcgagcagcaacttacctgg
acacaggcaggacagcgcattcagcgcattgccagtgcgctcttagcgcagggcgtggat
gttcaggaacgggttgcgattttctctcataactcgatgaattggtcgctggccgacctt
gcgctattgcacctgcgtgcgatcagcgtgccaatttatgccacgaatacggcggctcag
gcggcgttcattatcaatgatgcggatatccgcacgatattcgtcggtggtcaggagcag
ttggatgcgctgctgacgctgcgcgatacctgcccacagttgcgaaatattatcgtgatg
gatgagggcgttaacctgcacggtagcgacattgcgcaatctctgcatgagtttgaagcg
caggccgtagacgatttctggcgtgatgaatggcagcagcgcatcgatagtcgcgatctc
aacgatctgtttacgctgatttatacctctggcaccacgggtgaacccaaaggcgtcatg
ctggattacaccaacatggcgatgcaacttaagctgcatgacgagcgcttaagcatgtca
gaaaacgacatctcgcttagcttcttaccactttcccatgtattcgagcgtgcctggagc
ttcttcgtgatgcactgtggcgcacagaacgtgtacctcagcgatacgaatctggtgcgt
ggcgcgatgcaggcggtgaagccgacggtgatgtgcgccgtcccccgtttttatgaaaaa
gtgtatagcgccattcatgaaaaagtggcgcaggcaccgtggtatcgtcagcggctcttc
gactgggctgtcacacaggggcagcacgtttttctggctaagcaggcggcgaaaaagggc
ggactcttgcgccgcattatgcaccactatgccgaccgactggtgttagggaaactgcgt
cagcttctgggaggcgaaattcgctttatgccggcagcaggcgcacgactggatgacaac
atcattttgtttttccggtcgatcgggattcgtattatttatggttatggcatgaccgaa
acctgtgcgacggtttcctgctgggaagagaaccgtttccgcttaggctctattggtacg
ccgttaccgggtattgaggttcgcattggcgaggaaaaagagatcctggtgcgcggcgcg
accctcatgcgggggtatttccatcgtccgcaggaaaccgcagacgcttttaccgcagac
ggctggctgaaaaccggcgatgcgggagagctggacgctaacggtaatttgtttattacc
gaacgcttgaaggatctgatgaaaacctcgggcggtaaatatatcgccccgcagcatctg
gaaggcacgctggggcaggatcgtttcattgagcaggttgcgattatcgcggacacgcgt
aagtacgtgtcagcactgattgttccctgtttcgaggcgctggaagaatacgcccactct
attaatctgaagtaccacgatcgtctggaactgttgcgtcacagccatattattgaactg
ttcgaacagcgcctgcgggagatgcagaaagagctttcccgcgttgagcaggtgaagaaa
ttcacgttgttacctgtgccgttttcgatggcagaaggagagctgacgccaacgctcaaa
ctacgcaggaagatcatcaaccagcgttaccaactggaaattgatgcgatgtacgccgag
tcttga
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