Pectobacterium parmentieri SCC3193: W5S_4018
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Entry
W5S_4018 CDS
T02514
Name
(GenBank) Soluble lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pec01011
]
W5S_4018
Enzymes [BR:
pec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
W5S_4018
Peptidoglycan biosynthesis and degradation proteins [BR:
pec01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
W5S_4018
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
SLT_4
Motif
Other DBs
NCBI-ProteinID:
AFI92081
UniProt:
A0A0H3IAM0
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All DBs
Position
complement(4343873..4345807)
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AA seq
644 aa
AA seq
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MQVIKAGHWWYAVAAVCLAGVSGHVLADSLDEQRQRYQQVKQAWDSNQMDTVAQLMPTLR
SYPLYPYLEYRSLTQDLSQVSATQVKQFMATHPTLPPARNLNTSFVNELARRQDWIGLLA
FSPQPPKPVSARCNFYYAQWATGQRQGVWEATRDIWLTGRSLPNVCDKLFSVWQQAGEQT
PLTTLERARLAMDEGSASLVSYLIKQLPDDYKTMGDALLKLQNDPTSLESFARTVGPTDF
TRKVTLSAFTRTARQDTDNARSMLPVIARLQKMSAAERQDMEETIAWRLMGNDATPEQAQ
WRDGVVRRSTSTTLLERRVRMALGAGDRQGLTSWMARLPAEALQKDEWRYWRAVVLLDQG
KRQEGETLLRSLMQERGFYPMAAAQKLNERYPMTIMTAVKPDPSLSQLPEITRVRELMFW
QMDNLARSEWVGLVANRSKPQQEALARYAFEQRWADLSVQATIVAKLWDHLEERFPLAWN
DEFRRETQGKGISQSYAMAIARQESAWNPKARSPVGASGLMQLMPATAQHTAKMSNITFY
NNSSQLFDPETNILLGTSYLEYVYQTFGRNRILSSAAYNAGPSRVNTWLRNSAGRIDPVA
FIESIPFSETRGYVKNVLAYDVFYRYFLNQPANVLTDGEWQRRY
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgataaaagcaggtcattggtggtacgccgttgcggcggtatgtctggctggg
gtgtccggtcatgtgctggcggattctctggacgaacagcgtcagcgctatcagcaggtt
aagcaggcatgggacagcaaccagatggacacggtagcgcaactaatgccgacgctgcgc
agctacccgctttatccttatcttgaatatcgctcgcttacgcaggatctgagccaggtc
agcgcgacgcaggtgaaacagtttatggcaacgcacccgacgttgccgcccgctcgtaat
ctcaataccagctttgtcaatgaactggcgcgccgtcaggactggatcgggctgttggca
tttagcccgcagccgccaaagccggttagcgcccgctgtaacttctattacgcccagtgg
gcaaccggtcagcgtcagggcgtgtgggaagccacgcgtgatatctggctgaccgggcgt
tcgcttcctaacgtgtgcgataaactcttctccgtctggcagcaggcgggcgaacagacg
ccgctgacaacgctggaacgtgcacgtctggcgatggatgaaggcagcgctagtctggtg
agctacctcatcaagcaactgcccgacgattataaaacgatgggcgatgcgctgctgaaa
ctccagaatgaccccacttcgttggagagctttgctcgtaccgtcgggccaacggatttc
acccgtaaagtcacgctgtcagccttcacgcgtacagcgcgtcaggatacggacaatgcc
cgttcgatgctgccagtcattgcccgtttgcaaaaaatgagcgccgcagagcgtcaggat
atggaagaaaccatcgcctggcgtttgatggggaatgatgctacgccagagcaggcgcag
tggcgagatggcgtggtgcgacggagcacatcgaccaccttgctggaacgtcgcgtgcgc
atggcgttgggcgcaggcgatcgtcagggtttgacaagctggatggcgcgcttgccggcg
gaggcgttgcagaaagacgaatggcgctactggcgtgccgtcgtgctgttggatcagggt
aaacgtcaggaaggcgagacattattacgcagcctgatgcaggaacgcgggttctacccg
atggcggcggcgcagaaactgaacgagcgctatccgatgactatcatgacagccgtgaag
cctgacccttctttatcacaattacccgaaatcactcgcgtgcgggaattgatgttctgg
cagatggataatctggcgcgtagcgagtgggtcgggctggtggcgaatcgcagtaagccg
cagcaggaggcgttggctcgctatgcgtttgaacagcgctgggcagatttaagcgtacag
gcgacgattgtcgcaaaactgtgggatcatcttgaagaacgcttcccgctggcctggaat
gatgaattccgccgtgaaacgcagggcaaagggattagccagagctatgcgatggcaatc
gcccgtcaggagagcgcctggaatccgaaagcgcgttcgcccgtcggcgcatcgggtctg
atgcagttgatgcctgcgacggcgcagcataccgctaaaatgagcaatatcacgttctac
aataacagtagtcagttgttcgatcccgagacgaatattctgttgggaacgagctatctg
gagtacgtgtaccagacatttggtcgtaaccgcattctgtcttctgcggcttacaatgcc
gggccgtcgcgtgtgaatacctggctgaggaatagcgcgggacgtatcgatcccgttgcg
tttatcgaaagtatcccgttctcggaaacacgcggttacgtgaaaaatgtgctggcctat
gacgtcttctaccgctatttcctcaatcagccagccaatgtgctgacggatggggaatgg
cagcggcgttactga
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