Pectobacterium parmentieri SCC3193: W5S_4068
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Entry
W5S_4068 CDS
T02514
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase AmiB
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
W5S_4068
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pec01011
]
W5S_4068
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pec03036
]
W5S_4068
Enzymes [BR:
pec01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
W5S_4068
Peptidoglycan biosynthesis and degradation proteins [BR:
pec01011
]
Peptidoglycan biosynthesis and degradation
Amidase
W5S_4068
Chromosome and associated proteins [BR:
pec03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
W5S_4068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
LysM
LysM3_LYK4_5
AMIN
NMB0315_dom_I
LysM1_NFP_LYK
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
AFI92131
UniProt:
A0A0H3IAR0
LinkDB
All DBs
Position
complement(4399898..4401559)
Genome browser
AA seq
553 aa
AA seq
DB search
MMSRMVKLFIGVWLLLAGAAWAANLSDIKVDNASGQATVRLSFSGQPIYAFFPLSNPARV
VIDIRQSGVIQGLPLDFSGQNLIKRVRTSNAQDAQSLRLVLDLTQAAKTRAVTQKEGSGY
VVVFTITGDKAKTVQAPTPPVSRQQNSVPAEPAKNPFTNKPTVVVSGGASSPARQGNERV
VVAIDAGHGGQDPGAIGTNGLREKNVTISIARKLQVLLNNDPAFKGVLTRDGDYFISVMG
RSDVARKQGANLLVSIHADAAPNRNAKGASVWVLSNRRANSEMANWLEQHEKQSELLGGA
GDLLANSGADPYLSQAVLDLQFGHSQRVGYDVATKVLRELQRVGGLHKRRPEHASLGVLR
SPDIPSLLVETGFITNISEERLLGSNDYQEKIANAIYQGLRSYFQTHPMQSLPKQESRPR
QSAASDTATSGSNVTAAKASAGSTRHTVARGETLSSIARRYGVSLTAMRDVNKLNKDIVW
VGQRLNVPTTGTKQTASTPAPKNTAPVKHKVVKGDSLSAIAARYGVSMKEIQQANNLRSG
SVQLGQTLIIPSA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtcgtatggttaagctgttcatcggcgtatggctattgcttgcgggagcagcg
tgggccgccaatctatcggatatcaaggtggataatgcgtcaggccaagccacggtgcga
ctgagctttagcggccagccgatttatgcctttttcccgcttagcaaccctgccagagtg
gtcatcgatattcgtcagagcggtgtcattcaggggctgccgttggatttcagcgggcaa
aatctgattaagcgcgtgcgaaccagcaatgcgcaggatgcacaaagcctgcggttggtg
ctggatttaacgcaggcggccaaaacgcgagcggttacgcaaaaagaaggttcgggttac
gttgtcgtgttcaccatcacgggtgataaagcgaaaacggtgcaagccccaacgccccct
gtttcacggcagcaaaatagtgtgccggcagagccagcaaagaatccgtttactaacaag
cctacggtcgtcgtgagcggtggggcgtcgtcgcctgcccgacagggtaatgagcgcgtt
gttgtggcgattgatgccggtcacggcgggcaagatcctggtgcgattggcacgaacggg
ctgcgagagaaaaatgtcaccatctctatcgcccgtaagctgcaagttttgctgaataac
gatcccgcctttaaaggcgtattaacgcgtgacggcgactactttatctccgtcatgggg
cgttcggacgtggcgcggaagcagggcgctaacctgttagtgtcgatccacgccgatgct
gcgccgaaccgcaatgctaaaggtgcctcggtctgggtgctatccaaccgtcgtgcgaat
agtgaaatggcgaactggctggaacagcacgagaaacagtctgagttattgggcggtgcg
ggcgatttgctggcgaacagcggcgccgatccttacctcagtcaggcggtgctggatctg
caatttggccactcccagcgtgttgggtatgacgtggcgaccaaggtgctgcgtgagctc
cagcgtgttggaggcttgcataaacggcggccggaacatgccagcttgggagtgttgcgc
tcaccggatattccctctctgctggtggaaaccgggtttatcacgaatatctcggaagag
cggctattggggagtaacgactaccaggaaaaaattgccaatgcgatttatcaggggctg
agaagttacttccagacgcacccgatgcaatccctcccaaagcaggaaagccgcccacga
cagtcggcggcaagtgatactgcgacatcgggcagcaacgtaacggcggcaaaagcgagt
gcgggcagtacgcgtcataccgttgcgcgtggcgaaacactttcttcgattgcacggcgt
tatggtgtcagcctcacggcgatgcgtgacgtgaataagctgaacaaggatatcgtctgg
gttggacagcgcctgaacgttccgactaccgggacgaaacagacggcgtcaacgccagcg
cctaaaaacacagcgccggtgaagcataaggtcgtaaagggtgatagcctgagtgcgatc
gctgcccgttacggtgtcagcatgaaagagattcaacaggcaaataatctgcgttccggc
tcggtacaactggggcaaacgctgattataccgtctgcctga
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