Pectobacterium parmentieri SCC3193: W5S_4113
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Entry
W5S_4113 CDS
T02514
Name
(GenBank) Isocitrate lyase
KO
K01637
isocitrate/methylisocitrate lyase [EC:
4.1.3.1
4.1.3.30
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00630
Glyoxylate and dicarboxylate metabolism
pec00640
Propanoate metabolism
pec01100
Metabolic pathways
pec01110
Biosynthesis of secondary metabolites
pec01120
Microbial metabolism in diverse environments
pec01200
Carbon metabolism
Module
pec_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
W5S_4113
00640 Propanoate metabolism
W5S_4113
Enzymes [BR:
pec01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.1 isocitrate lyase
W5S_4113
4.1.3.30 methylisocitrate lyase
W5S_4113
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Gene cluster
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Motif
Pfam:
ICL
PEP_mutase
NDUS4
Motif
Other DBs
NCBI-ProteinID:
AFI92174
UniProt:
A0A0H3IDQ0
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All DBs
Position
complement(4452149..4453456)
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AA seq
435 aa
AA seq
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MTTSRTQQVQHIEKEWKTARWEGITRPYSAEDVINLRGSVNPECTLAQLGAARLWNLLHG
ESRKGYVNCLGALTGGQALQQAKAGIEAIYLSGWQVAADANLASSMYPDQSLYPANSVPA
VIERINNTFRRADQIQWANHIEPGDKRYTDYFLPIVADAEAGFGGVLNAFELMKSMIEAG
AAAVHFEDQLASAKKCGHMGGKVLVPTQEAVQKLVAARLAADVLGVPTLLVARTDADAAD
LLTSDCDEYDRDFITGERTVEGFYRTRAGIEQAISRGLAYAPYADLVWCETSTPDLSLAR
RFAEAIHAKFPGKLLAYNCSPSFNWKKNLDDSTIARFQDELSAMGYKYQFITLAGIHSMW
FNMFDLAHAYAQGEGMRHYVEKVQQPEFEAIKDGYTFSSHQQEVGTGYFDKVTNIIQGGE
SSVTALTGSTEEQQF
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctctcgtacccaacaagtccagcatatcgaaaaagagtggaaaaccgcccgc
tgggaaggtattacgcgcccctacagcgcagaagatgtgattaatctacgtggatcggtg
aacccggaatgcacactcgcacagctcggtgcggcgaggctatggaacctgctgcatggc
gaatcccgcaaaggctatgttaactgcctgggggcgctgacgggtgggcaagccttgcag
caggcgaaagccggcattgaggctatttacctttccggttggcaggtggcggcggatgcc
aatctggcgtccagcatgtatcccgatcagtcgctctacccagcaaattcggtgcctgcg
gtgatcgaacgcattaataacacgttccggcgtgccgaccagattcagtgggcgaatcac
attgagccgggtgataagcgctataccgattacttcctgccgattgttgcggatgcggag
gccggatttggcggtgtgcttaatgcgttcgagctgatgaagtcgatgattgaagcgggt
gcggcggcggttcactttgaagatcaactggcatcggcgaagaaatgcggacacatgggc
ggcaaggtactggttcccacgcaggaagccgttcagaagctggttgcggcccggctggca
gcggatgtcttgggcgtgccgaccttactggttgcgcgaactgatgcggatgcggcagat
ttactgacgtccgactgtgatgaatatgaccgtgatttcattaccggggaacgcacggtg
gaaggcttctatcgcacgcgtgcggggattgaacaggcgatcagccgtgggctagcctac
gcgccttatgcggatttagtgtggtgcgaaacctcgacgccggatttatcgctggcgcgt
cgttttgctgaggccatccacgcgaaatttcccggcaagctactggcgtacaactgttcg
ccttcctttaactggaagaagaatctggatgacagcacgattgcgcgttttcaggatgaa
ctgtcggcaatgggctacaagtatcagtttattacgctggctggcatccacagcatgtgg
ttcaacatgtttgacctggcgcatgcctatgcgcaaggtgaagggatgcggcactacgta
gaaaaagtacagcagcctgaattcgaggcgattaaagacggctataccttctcatcgcat
cagcaggaggtggggacaggttatttcgataaggtaacgaacatcattcagggaggcgag
tcttcagtgacggcgctgacgggatcgacggaagaacagcagttctga
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