Pectobacterium parmentieri SCC3193: W5S_4175
Help
Entry
W5S_4175 CDS
T02514
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00260
Glycine, serine and threonine metabolism
pec00460
Cyanoamino acid metabolism
pec00630
Glyoxylate and dicarboxylate metabolism
pec00670
One carbon pool by folate
pec00680
Methane metabolism
pec01100
Metabolic pathways
pec01110
Biosynthesis of secondary metabolites
pec01120
Microbial metabolism in diverse environments
pec01200
Carbon metabolism
pec01230
Biosynthesis of amino acids
pec01240
Biosynthesis of cofactors
pec04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
W5S_4175
09102 Energy metabolism
00680 Methane metabolism
W5S_4175
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
W5S_4175
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
W5S_4175
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
W5S_4175
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
W5S_4175
Enzymes [BR:
pec01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
W5S_4175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AFI92231
UniProt:
A0A0H3I9T7
LinkDB
All DBs
Position
complement(4497286..4498557)
Genome browser
AA seq
423 aa
AA seq
DB search
MYDTSFTLTDFDPELADAILHEEHRQETHVELIASENYASPLVMAIQNSVFTNKYAEGYP
GKRYYSGCEYVDVAERLAIERVKALFDCDYANVQPHAGAQANAAVFLALTNPGDTVMGMN
LAQGGHLTHGNPSNFSGRHYKIVPYGLDPETGLIDYDEMERIALETRPKMLIGGFSAYSR
HKDWARMRTIADKVGAIFWVDMAHVAGLVAAGEYPTPLPHAHVVTSTTHKTLRGPRGGII
LAKGQSEDFYKKLNAAVFPGIQGGPLMHVIAAKAIAFKEALRPEFTVYQRQVVANARAMA
RIIQLRGYKIVSDGTDNHLLLIDLSAKPYTGKEADAALSEAYITTNKNSVPNDPRSPFVT
SGLRIGTPAVTTRGFGVAECEQLAGWLCDVLDGLGAGNEELTAIRDRVREQVVALCRRYP
VYQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacacctcttttacgcttaccgacttcgaccctgagttggccgatgccatcctg
catgaagaacaccgtcaggaaacccacgttgaactcatcgcttcagagaactatgccagc
ccgctggtgatggcgatccagaattccgtcttcaccaacaaatatgcagaaggttacccc
ggcaagcgctactacagcggctgcgagtatgtagacgtagccgaacgcctggctatcgag
cgggttaaagcgctgtttgactgcgattacgctaacgttcagccccatgccggcgctcag
gctaatgcggccgtgtttctggcactgactaaccctggcgacaccgtgatggggatgaat
ctggctcaaggtgggcatttgactcacggtaacccctccaacttctctggtcgccattac
aagatcgtaccttatggtcttgaccctgaaacagggcttatcgactatgacgaaatggag
cgtattgccttggaaacccggccaaaaatgttaataggcgggttctctgcctattcacgt
cacaaggactgggcgcgcatgcgcacgattgctgacaaagtgggagctatcttctgggtg
gatatggcgcatgtggctggcttagtggcagcaggtgagtacccgactccgctccctcac
gcacatgttgtgacgagtacaacgcataaaaccctgcgcggcccgcgcggtggaattatt
ttggccaaaggacagagtgaagatttttacaaaaagctcaacgctgccgtgttccccggt
attcagggcggcccgctgatgcatgttattgccgccaaagcgatagccttcaaggaagcg
ttgcgccctgagttcacggtttatcagcgtcaggttgtggctaacgccagggcaatggcg
cgtattatccaattgcggggttacaagattgtctccgacggcaccgacaaccatttactg
ctgatcgacctgtccgctaagccttataccggtaaggaggccgacgccgcgctgagcgag
gcttatatcacgacaaataagaattcggtgcctaacgacccgcgttcaccttttgttact
tcaggcttgcgtattggtacgccagccgtcacaacgcgtggtttcggtgtggcagagtgc
gagcaattggcgggatggctatgtgatgtgctggatggactgggtgccgggaatgaagaa
ttaacggcgatacgcgatcgcgttcgtgagcaagtggtagcactgtgccgccgctatcct
gtgtatcaataa
DBGET
integrated database retrieval system