Pectobacterium parmentieri SCC3193: W5S_4361
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Entry
W5S_4361 CDS
T02514
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00521
Streptomycin biosynthesis
pec00523
Polyketide sugar unit biosynthesis
pec00525
Acarbose and validamycin biosynthesis
pec00541
O-Antigen nucleotide sugar biosynthesis
pec01100
Metabolic pathways
pec01110
Biosynthesis of secondary metabolites
pec01250
Biosynthesis of nucleotide sugars
Module
pec_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
W5S_4361
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
W5S_4361
01055 Biosynthesis of vancomycin group antibiotics
W5S_4361
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
W5S_4361
00525 Acarbose and validamycin biosynthesis
W5S_4361
Enzymes [BR:
pec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
W5S_4361
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
AFI92413
UniProt:
A0A0H3I8W7
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Position
complement(4704172..4705239)
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AA seq
355 aa
AA seq
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MKRILITGGAGFIGSALVRYILTETQDSVVVVDKLTYAGNLSSLAPVAESERFAFERVDI
CDRAELDRVFAAYQPALVMHLAAESHVDRSIDGPAAFIETNIVGTYTMLEAARHYWQNLA
DADKGVFRFHHISTDEVFGDLHGTDDLFTETTSYAPSSPYSASKASSDHLVRAWLRTYGF
PTVITNCSNNYGPYHFPEKLIPLVILNAVAGKPLPVYGDGAQIRDWLFVEDHARALYKVV
TEGEIGETYNIGGHNERKNIEVVQTICELLEELAPNKPAGVAHYRDLITYVKDRPGHDMR
YAIDAGKIERELGWRPEETFETGMKKTVSWYLNNEKWWRSVQDGSYTGERLGLND
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgtattttaattaccggtggagctgggtttattggttcagcgttggtcagatac
attctgactgaaacgcaggatagcgttgttgttgtcgataaactgacttatgcggggaac
ctgtcttcgctggcaccggttgctgagagtgaacgttttgcgttcgagcgggtggatatc
tgcgatcgcgctgaattggatcgcgtctttgcggcttaccaacctgcactggtgatgcat
ttggcggcggaaagccacgttgaccgctctatcgatggcccggcggcgtttatcgaaacc
aatattgtcggcacctataccatgctggaagcggcacgccactactggcagaacctggca
gatgcggacaagggggtgtttcgttttcaccatatttctaccgatgaagtgtttggcgat
ctgcatgggacggacgatctgtttaccgaaaccacgtcttatgcgccgagcagcccctat
tcagcatcgaaagcgtctagcgaccaccttgttcgtgcctggctgcgtacctacgggttc
ccgacggttatcaccaactgctcgaataactacggcccttaccatttcccagagaagctg
atcccgctggtcatcctgaatgcagtcgcgggcaaaccgttaccggtttacggtgacggc
gcgcaaattcgtgactggctgtttgtcgaagaccacgctcgcgcactgtacaaagtcgtg
acggaaggcgaaatcggcgagacgtacaacatcggtggtcataacgaacgtaaaaacatt
gaagtggtgcagactatttgtgaactgctggaagagctggcaccgaataagcctgctggc
gtagcgcattatcgcgatctcatcacctacgtgaaagaccgcccaggccacgatatgcgt
tatgccattgatgccggaaaaattgaacgtgaactgggctggcgtccagaagaaacgttt
gagacgggcatgaaaaaaaccgtcagttggtatctgaataacgaaaaatggtggcgcagc
gtgcaggacggttcttataccggtgagcgtttaggactgaacgactaa
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