KEGG   Pectobacterium parmentieri SCC3193: W5S_4370
Entry
W5S_4370          CDS       T02514                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
pec  Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:pec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pec03400]
    W5S_4370
Enzymes [BR:pec01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     W5S_4370
DNA repair and recombination proteins [BR:pec03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    W5S_4370
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_11
Other DBs
NCBI-ProteinID: AFI92422
UniProt: A0A0H3IEB9
LinkDB
Position
complement(4715335..4717356)
AA seq 673 aa
MRLNPSQQHAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRQCGYQARHIAAVTFTNKAA
REMKERVAQTLGRKETRGLMIATFHTLGLEIIKREYAALGMKSNFSLFDDQDQIALLKEL
TEQWLENDKVLLQQLISTISNWKNDLIDPAGAAATARSERDKLFVHCYSLYHEHLRACNV
LDFDDLILLPTLLLKQNAEVRERWQNRLRYLLVDEYQDTNTSQYELVKLLVGTRARFTVV
GDDDQSIYSWRGARPQNLVLLQQDFPALDVIKLEQNYRSSGRILKAANILIANNPHVFEK
RLFSELGYGDELKVITANNEDHEAERVVGELIAHHFIKKTQYGDYAILYRGNHQSRLFEK
MLMQNRIPYRISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATMKK
LGEWAGQRNKGLFSASFDFGLSQSLTGRGLESLQRFTQWMEGISRLAEREPVAAVRDLIH
GLDYESWLYETSPSPKAAEMRMKNVNQLFSWMTEMLEGSDLDEPMTLTQVVTRFTLRDMM
ERGESEEELDQVQLMTLHASKGLEFPYVFLVGMEEGLLPHQSSIDEDNVDEERRLAYVGI
TRAQRELFFTLCKERRQYGELMRPEPSRFLLELPQDDVVWETERKVVSAQERMQKGQTNV
ANIRAMLAKAKGE
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgcgcttaaaccccagccaacaacatgccgtcgaattcgtcaccggaccttgtctggta
ctggcgggcgcaggctcaggcaagacccgcgttatcaccaataaaattgcgcaccttatc
cgtcagtgtggctatcaggctcgacacattgctgcggtaacgtttaccaataaagcggcg
cgtgaaatgaaggaacgtgtggcgcaaacgctggggcgtaaagagacgcgcgggctaatg
attgcgaccttccatacgttggggctagagatcatcaagcgtgaatacgccgcgctgggt
atgaaatccaatttctccctgtttgacgatcaggatcagatagcgctgctgaaagagctt
acggaacagtggctggaaaacgataaagttctgctgcaacaactgatctcaacgatctca
aattggaaaaatgatctgatcgatcctgccggtgcagccgcgaccgctcgatccgaacgc
gacaagctgtttgtacattgctactcgctttatcacgaacacctgcgtgcctgtaacgtg
ctggatttcgacgatctgattttgctgcctacgctgttgctgaagcagaatgccgaagtg
cgtgaacgctggcagaaccgcttacgctacctgctggtggatgaatatcaggataccaat
accagccagtacgagctggttaagctgctggttggcactcgcgcacgctttaccgtcgta
ggggatgacgatcagtctatttactcctggcgtggcgcacggccacagaatctggtgtta
ttacagcaggatttccccgcgcttgatgtgatcaaactggaacagaactaccgttcatcc
gggcgtattctgaaagcagccaatattctcatcgctaataacccgcacgtttttgaaaag
cggctgttctcggagctgggttacggtgatgagcttaaagtgattaccgccaacaacgaa
gatcacgaggccgagcgtgtcgttggcgaattgattgcccatcactttattaaaaagacc
cagtacggcgactatgccattttgtatcgtggcaaccaccagtcacgtctgtttgaaaag
atgttgatgcagaaccgtattccatatcgtatctccggcggcacgtcttttttctctcga
cctgaaatcaaagatttactggcttacctgcgtgtattgactaacccggacgatgacagc
gcgttcttacgcatagtgaacacgcccaaacgtgagattggtccggcgacgatgaagaag
ctgggcgagtgggcagggcagcgtaataaaggcctgttcagcgcgagttttgatttcgga
ttgagccagtctctgactggccgtgggctggaatccctgcaacggtttacgcagtggatg
gagggtatttcccgccttgctgagcgtgagcctgttgccgccgtgcgtgacctgattcat
gggttagactatgaaagttggctgtatgaaacctcacctagtccaaaagcagcggaaatg
cggatgaagaacgtcaatcagctattcagttggatgacggaaatgctcgaaggctccgat
ctggatgaacccatgacgctgacgcaggtggtgacgcgctttacgctgcgggacatgatg
gagcgtggtgaaagtgaagaggaattagatcaggtacagctaatgacgctacatgcgtcc
aaaggcctggaattcccctacgtctttttagttgggatggaagagggcctgttgccgcac
cagagcagcattgatgaagataacgttgacgaagaacgccgtctggcatacgtggggatt
acacgtgctcagcgcgagctgtttttcacgctgtgtaaagaacgccgccagtatggcgaa
ctcatgcgcccagaaccgagccgcttcctgcttgaactgccgcaggatgatgtggtgtgg
gaaacggaaagaaaagtggttagcgcacaagagcgtatgcagaaaggtcaaacgaacgtc
gctaatattcgggcgatgttggcaaaagcaaaaggggagtaa

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