Pectobacterium parmentieri SCC3193: W5S_4388
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Entry
W5S_4388 CDS
T02514
Name
(GenBank) HTH-type transcriptional regulator hdfR
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pec03000
]
W5S_4388
Transcription factors [BR:
pec03000
]
Prokaryotic type
Helix-turn-helix
LysR family
W5S_4388
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Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AFI92440
UniProt:
A0A0H3IBH3
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Position
4738646..4739473
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AA seq
275 aa
AA seq
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MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLETQLGANLFTRHRNNIRLTPA
GERLLPYAESLIGTWQIAKKEVARSQQHSLLSVGATASLWEVYLTPWLQSLYQQRPLLQL
EARIALRHSLVKQLHERQLDLLITTEPPKMEELASQLLGNFSLSLFAAEAHPPGQELPYI
KLEWGADFHQQEHRLLANEQLPVLTTTSAHLTRQLLETTGGCAFLPSHWLQTYTNLQIVG
DSQPVVRPFYAVWLQNSDQQTMIRQLLKTPILINA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
gtggataccgaattactaaaaacctttctggaagtcagtaggacaagacactttggccgt
gccgccgaatccctgtatctgacgcaatcagcggtgagttttcggattcgccagttagag
acgcaacttggtgccaacctgttcacacgtcatcggaacaatatacgtctgacccccgct
ggcgaacgacttctaccctatgcggaaagccttatcggtacctggcagatcgccaaaaaa
gaggtcgcacgctctcagcaacacagcctgctctcggtaggagcaaccgcttcgttatgg
gaggtatatctgacaccgtggctacaatctctctaccaacagcgcccattgctccagtta
gaagcgcggattgccttgcgccactcgctggtaaagcaactccatgaacgtcagttggat
ctgttgattacgactgaaccacccaaaatggaagaattggcgagccagctactgggcaat
ttttccctttcgctgtttgcagcagaagcgcacccacccggacaggaactgccctatatc
aaacttgaatggggagctgattttcatcagcaggaacatcgcctgctagccaacgagcaa
cttcctgtcttgacaacaacatcggcccatttaacccgtcagttgcttgaaacaaccggc
ggttgcgcgtttttacctagccattggttacaaacgtacaccaatctgcagatagtcggc
gacagtcagcccgtcgtgcgtccgttttatgccgtttggttgcaaaatagcgatcaacag
acaatgatccgtcagttgttgaaaacgcctattttaataaatgcatga
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