Pectobacterium parmentieri SCC3193: W5S_4479
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Entry
W5S_4479 CDS
T02514
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pec02000
]
W5S_4479
Transporters [BR:
pec02000
]
Other transporters
Pores ion channels [TC:
1
]
W5S_4479
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
AFI92525
UniProt:
A0A0H3IBR8
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All DBs
Position
complement(4831020..4833224)
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AA seq
734 aa
AA seq
DB search
MSCVLTLPATTQAADPQIATDNAPQTEATTAAPVQLKRVKVNAQRAPIQPPTTLASVIDG
KTLEEERLYRFEELSQLVTGLDVDTVDVMDTTVTIRGIGDGGESGTNIGMPGSVGLFVDG
VYLSRPGVISNDLLDIDSTRVLKGPQGAAYGFNTTGGAIDIRTRKPTFTPEYSLEQSFGQ
RGYLQSKLMASGPLSDHWAGRINLSRTERGGNVTNIESGHKLGGSTNNGVRGQLLYQPND
SFSLRITGDYSDSTQRPVSVLVSATDAFRTRAEQTGLKVVGGRQVAMDDENVIRVAQGGG
SVEANWKLKSGFSLNSLSSLRYFRVLPSTADNWNIPLYNDSGADVRDRVWSQSFWLDSPK
GNKVDYSLGVDYWGENLDTEANSRYYNDNRVRTWVGNGYQGINVQRFGTLDDTVYSVYGR
GTWHAADKLDVIVGLRHTYEKKEGTFVRRNRATFDSGPLSQTNRLPSGSVSLNWFAAPNV
TPYLTLGYGEKSGGLNVSSGAARQLGIDSLYVDPEKTRSAELGVKTHWLQRKVEWNTALF
WSVVEDFQNNAYDEETDTSYLINAGKFRSRGGESQLTLRPLDGLSISLAGTLLDASYLNF
PNARCPAEISAVSCDMSGKRVFKSPTLSYNTRVRYQWDTPNNLQASVSGQWSWRSWAYGT
LDDSESNRIPAYGVLNLSSGLSGKQGDNRWNVSLWVKNALDKNYYRSVRGSSATTGVIGE
PRMVGISVGYDFKG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcgttttaacgctccccgccacaacgcaggcagccgatccgcaaatcgcaacg
gataatgctcctcaaaccgaggcgacaaccgccgcccccgtccaactaaaacgcgtgaaa
gtgaacgcccaacgtgcacccattcagccaccgaccacgctggcatcggtaatcgacggc
aaaacgctcgaagaagagcggctctaccgctttgaggagctgtcacagctagtgacaggt
ctggatgtcgataccgtcgatgtgatggatacgaccgtgaccatccgtgggattggcgat
ggtggcgagagcggcaccaatatcggtatgccgggcagcgtggggctgtttgtcgatggc
gtctatttgtcccgccctggtgttatctctaacgatttgttggatatcgacagcacccgc
gtactgaaaggcccgcagggtgccgcctatggctttaatactaccggcggcgcgattgat
attcgcacccgcaaaccgactttcacccccgaatattcactagagcaatcgttcggacaa
cgcggctatctgcaatccaaactgatggcatccgggccactcagcgaccactgggcaggg
cgcatcaatctgtcacgcactgaacgcggcggcaacgtcacgaatatcgaaagcggccat
aaactcggaggcagcaccaataacggcgtgcgcggccagttactgtatcagcccaatgac
agctttagcctcagaatcaccggcgactacagtgattctactcagcgccccgtttcggtt
ctggtgagcgcaaccgacgcttttcgcactcgcgccgaacaaactggccttaaggtcgtc
ggcggtcgtcaggtcgccatggatgacgagaacgtcattcgtgttgcgcaaggcggcggc
tcggtcgaggccaactggaaactgaagagtggatttagcctgaattccctctcctcattg
cgctatttccgcgtcttgcccagtacggcggacaactggaacattccactctataacgac
agcggtgccgatgtacgcgatcgcgtctggtcacaaagcttttggctggattcgcccaaa
ggcaataaggtcgattactcactcggcgtcgattactggggagagaacctcgataccgag
gcaaacagccgctactacaacgacaatcgcgtgcggacgtgggtagggaatggctatcag
ggtattaacgtgcagcgctttggtacgctagatgacaccgtttattccgtctatggtcgc
ggaacctggcacgctgccgataagctggacgtcatcgtcggcctgcgccacacctacgag
aaaaaagagggaacgtttgtccgtaggaaccgcgcaaccttcgattctggcccactctcg
caaaccaaccgcctgccttcaggctccgtcagcctgaactggtttgcggcacccaacgtc
actccttatctcacgctgggctacggggaaaaatccggcggcctgaacgtgtcatctggg
gcagcaaggcagttggggatcgactcgctgtacgtcgatccagagaaaactcgctcggcg
gagctgggggttaaaacccactggctacagcgcaaagtggaatggaataccgcgctgttc
tggagcgtcgtcgaagatttccagaataacgcctatgacgaagaaacggataccagctac
ctgattaatgccgggaaattccgctcacgcggcggggaatctcagctaacgctacgcccg
cttgatggcctgagcatcagtctggccggtacgctgctggatgccagttatctgaacttc
cctaacgcccgctgcccggcagaaatttccgccgtctcgtgcgatatgtcaggaaagcgc
gtcttcaaatcccccacgctgagctacaacacgcgcgtgcgttatcagtgggatacgcca
aacaatctgcaagcttcggtttccgggcaatggtcatggcggagctgggcttacggtacg
ctcgatgattccgagagcaaccgtattccggcctacggcgtcctgaacctgtctagcggg
ctgagcggcaagcaaggtgacaaccgctggaacgtgtcgctgtgggtgaaaaacgcgctg
gataagaactactaccgctccgtcagaggctccagcgccacgacaggcgtgattggcgaa
ccgcgcatggtcgggatatcggtcgggtacgacttcaaggggtaa
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