Pectobacterium parmentieri SCC3193: W5S_4520
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Entry
W5S_4520 CDS
T02514
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00541
Biosynthesis of various nucleotide sugars
pec01100
Metabolic pathways
pec01250
Biosynthesis of nucleotide sugars
Module
pec_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
W5S_4520
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pec01005
]
W5S_4520
Enzymes [BR:
pec01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
W5S_4520
Lipopolysaccharide biosynthesis proteins [BR:
pec01005
]
Core region
W5S_4520
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
AFI92566
UniProt:
A0A0H3IAV8
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All DBs
Position
4873195..4874127
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNNIGYRDILVVDNLKDGTKFVNLVDLDIADYVDKEDFIASI
VAGDDLGDIDAVFHEGACSSTTEWDGKYMMDNNYQYSKDVLHYCLDRSIPFLYASSAATY
GGRNNNFIEDRQYEQPLNVYGYSKFLFDQYVREILPEAESQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINQGENPKLFSGSESFKRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRA
ESFQAVADATLAFHHKGSVEYIEFPEKLKGRYQAYTQADLTNLRAAGYDKPFKTVAEGVA
EYMAWLNRTV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttactggcggagccggttttatcggcagcaatatcgtaaaagctctgaat
aacatcggctaccgagacattctggttgtcgataacctgaaagacggcaccaagttcgtc
aatctggtcgatctggacatcgcagattacgtggataaagaagatttcatcgccagcatc
gttgcgggtgacgatctgggcgatatcgatgccgtattccatgaaggtgcttgctcctcc
accaccgagtgggatggcaaatacatgatggataacaattatcagtattccaaagacgtg
ctgcactactgcctcgatcgcagtattccgttcctgtatgcctcttctgccgcgacctat
ggcggccgcaacaataacttcatcgaagaccgtcaatacgagcagccgctgaacgtctat
ggctattccaaattcctgttcgatcagtacgtgcgtgagattctgccggaagcggaatcg
cagatctgtggtttccgctatttcaacgtctatggaccgcgcgaaggccacaaaggcagc
atggcgagcgtcgcgttccacctgaacaaccagattaatcagggtgaaaatccaaagctg
ttctccggtagcgagagcttcaaacgtgacttcatttacgtcggtgatgtcgccgccgtc
aacctgtggttctggcagaacggtgtttccggcatcttcaactgcggcaccggtcgtgcc
gaatccttccaggctgtcgccgacgccacgctggccttccatcacaaaggcagcgtggaa
tacatcgaattccctgagaagttgaaaggccgttatcaagcctatacgcaggctgacctc
actaacttgcgtgctgcgggctacgataagccgttcaaaaccgtcgccgaaggcgtagcg
gaatatatggcctggctgaaccgtaccgtttaa
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