Pectobacterium parmentieri SCC3193: W5S_4524
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Entry
W5S_4524 CDS
T02514
Name
(GenBank) Lipid A-core:surface polymer ligase WaaL
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00540
Lipopolysaccharide biosynthesis
pec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
W5S_4524
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pec01005
]
W5S_4524
Enzymes [BR:
pec01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
W5S_4524
Lipopolysaccharide biosynthesis proteins [BR:
pec01005
]
Core region
W5S_4524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
AFI92570
UniProt:
A0A0H3IBW2
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All DBs
Position
4876194..4877477
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AA seq
427 aa
AA seq
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MISLPTVNKYMLNELRYELGKTPSISSAVALNAVFPGCLLTLAIMPFSSILAGWLFYLTG
SLSVFYVVTHLRTVIVAKRRLLIPLCLLAIGITNLIWYYHYYQPDSLFPYVYNAYRTSAH
AGILGAFIVLTALHIRQQQQKQSLFYIIAICVLALGYAFYQSLFSGMHRIGLAFGTATSA
AYFLTFIGALSAQALLKLDSTYKYYLYLGHFLLVTVAILLTETRAAIFVYPIVGATILLS
EVRHNKRLFIKAFIGSAATLLLCLFLFQETIHQRVNDLFNDVHSYNMNNSKTSVGARIAM
YQSGVEAGEDALLGQSAEQRAARIITQAEQKPSLAGAVEYLNVHLHNEVVDAFSLKGLPG
AILLILLYASLFYFSFFVLRSHLSAALLFSLLMYGLSDVILYSRDMLIAWLMTFCLGTTL
TGKWLKN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgatatcgctcccgactgtgaacaaatatatgcttaatgaattaaggtacgaactgggc
aaaacgcccagtataagctcggctgtcgcacttaacgccgtcttccccggctgtttactc
acattagccattatgccatttagtagcattcttgccgggtggcttttttatctcacaggt
tcgctatctgttttctatgtcgtgacacacctaagaaccgtcatagtcgctaaacgacgc
ttactgatcccactgtgcctgctggctatcggcataaccaatctcatttggtactaccac
tattatcaacccgatagccttttcccttatgtatataacgcctacaggacatctgcacac
gccggtattttgggcgcatttatcgtgctgacagccctgcatatcaggcaacaacagcaa
aagcagtcgctcttctacatcatcgcaatctgtgtgttagcgctgggctatgcgttctat
cagtcactgttcagtggaatgcatcgcattggattggcatttggtacagcaaccagcgcc
gcctattttcttacttttattggcgcgttaagcgcacaggcgctgctgaagctcgattca
acctataagtattatctctatctggggcattttctgttagtcactgtggccattctactg
acagaaacccgggcagccatatttgtctaccctattgttggcgcgaccattttactgtca
gaagtcagacacaataaacgcttgttcataaaggcattcatcggctcagcagcgacgctg
cttctgtgcttattcctgtttcaggagacgattcatcaacgcgtcaacgacctgtttaat
gacgtacacagctacaacatgaataacagcaaaacatcagtgggtgcacgaatcgccatg
taccaatccggtgtcgaagcaggagaagacgcgttattggggcaatctgccgaacagcgc
gccgctcggatcattacacaagcggaacaaaaaccgagcttagcgggtgcagtcgaatat
ctgaatgtccatctacataacgaagtggttgatgccttttctcttaaagggttaccggga
gcaatattgctaatattgctctatgcctccttattttatttttcattttttgttctgcgc
agccatctctccgccgcactgcttttttccctactgatgtatgggcttagcgacgtcatc
ctctattcacgggatatgctcattgcatggctgatgacgttttgcctcggcacaacgctg
accggaaaatggctaaagaattag
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