Pectobacterium parmentieri SCC3193: W5S_4528
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Entry
W5S_4528 CDS
T02514
Name
(GenBank) Lipopolysaccharide core biosynthesis protein RfaG
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00540
Lipopolysaccharide biosynthesis
pec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
W5S_4528
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pec01005
]
W5S_4528
Lipopolysaccharide biosynthesis proteins [BR:
pec01005
]
Core region
W5S_4528
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_transf_4
Glyco_trans_4_4
Glyco_trans_1_2
Flag1_repress
Motif
Other DBs
NCBI-ProteinID:
AFI92574
UniProt:
A0A0H3IBZ8
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Position
4880538..4881653
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AA seq
371 aa
AA seq
DB search
MIIAFCVYKYFPFGGLQRDFLSIALTCQKQGHDIRVYTSEWQGDKPEGFDIVLVPISGLG
NHTRHRRFSDWIQRHLQQHPVDRVVGFSKMPGLDFYYAAEGCTAEKAVQEKGFFYRLTPR
YRGYAALERDVFDRNSHTRMLMLTPRQIAHFQKHYGTQDERFFMLPPGISSDRKYSTRTP
DTRARFRQQHKLDENGFVLLQVGSDFKRKGVGRSLIAIASLPQELRQQVMLLVVGQDDPK
PFQQQAEQLGIGKQIHFFSGRDDIPDFMAAADLLLHPAHQEAAGIVLLEAIAAGLPILVT
DACGYAFYIERSQAGQVISEPFSQTELNHALSHALSQPKTLKQWAENARHFADTEDIYSL
PEKAAQLIIES
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgataatcgcattctgcgtctataaatactttcctttcggcgggctacagcgggatttt
ctgagcattgcactaacctgccaaaaacaaggccacgacattcgtgtttacacgagtgaa
tggcaaggcgacaaacctgaagggttcgacatcgtcctcgtacccatctcaggactgggt
aatcatactcgccatcgccgtttttctgactggatacaacgtcatttgcagcaacaccct
gtcgatcgcgttgttgggtttagtaagatgccagggctggacttctactatgctgctgag
ggatgtacagcagaaaaagcggttcaggaaaaaggtttcttttatcgactaacgccccgc
tatcgcggatatgcggcgctagaacgagatgtgttcgacagaaatagccacacacgtatg
ctgatgctaacaccgcggcaaatcgcgcattttcagaagcattatggcacacaagacgaa
cgcttctttatgctgccaccgggtatttcatcagatagaaaatacagcacacgtactcca
gatacgcgcgctcgatttcgccagcaacataagctggatgaaaacggattcgttctgtta
caagtgggttccgacttcaaacgtaaaggggttggccgcagcctgatcgctatcgccagc
ttgccacaggaactgcgtcaacaagtcatgctgcttgttgttggccaagacgatccaaaa
ccgtttcaacagcaggctgaacaactcggtattggtaaacaaatacatttcttctcaggc
cgagacgatattcctgactttatggcggctgcggatctattactgcatccggctcatcag
gaagctgcgggcatcgttttgcttgaggctattgctgccggattaccgatactcgttacc
gatgcatgtggttatgctttttacattgagcgctcgcaggcaggacaagttatttctgaa
ccctttagccagacagaactgaatcatgcgttatcacacgcgctcagtcagccaaaaacg
ctcaaacagtgggcagaaaatgcccgccactttgccgacacagaagatatttatagtctg
ccggaaaaagcagcacagttaattatcgaatcataa
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