Pectobacterium parmentieri SCC3193: W5S_4545
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Entry
W5S_4545 CDS
T02514
Name
(GenBank) HTH-type protein slmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pec03000
]
W5S_4545
03036 Chromosome and associated proteins [BR:
pec03036
]
W5S_4545
Transcription factors [BR:
pec03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
W5S_4545
Chromosome and associated proteins [BR:
pec03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
W5S_4545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
TetR_C_6
WAPL
HTH_11
DUF6262
Motif
Other DBs
NCBI-ProteinID:
AFI92591
UniProt:
A0A0H3IAY4
LinkDB
All DBs
Position
4895931..4896527
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AA seq
198 aa
AA seq
DB search
MAEKENTKRNRREEILQALAQMLESSDGSQRITTAKLAANVGVSEAALYRHFPSKTRMFD
SLIEFIEDSLTTRINLILQDEKETFNRLRLILLLILGFAERNPGLTRIMTGHALMFEQDR
LQGRINQLFERIESQLRQVLREHKLRDGKGFQHDETLLASQLLAFCEGMLSRFIRSEFRY
RPTQEFDTRWPLLAAQLN
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaagaaaatacgaaaaggaatcgccgcgaggaaattttgcaggcgctggcg
cagatgctggaatccagcgacggtagccaacgcatcaccacggcaaaactggctgcgaac
gttggcgtgtccgaagcggcgctctaccggcatttccccagtaaaacgcggatgtttgat
agcctgattgaatttattgaggatagcctgaccacccgcattaacctgattctgcaagac
gaaaaagaaacgtttaatcgtcttcgtctgattttgctgctgattttagggtttgcggaa
cggaatcctggtctgactcgtatcatgacaggtcacgcgctgatgtttgaacaggatcgc
ctgcaggggcgtattaaccaactgtttgagcgtattgaatcgcagttacgtcaggtatta
cgcgagcataagctacgcgatggcaaaggtttccaacatgatgaaacgctgttggctagc
cagttattagcgttttgtgaagggatgctgtcgcgctttattcgctctgaattccgctat
cgtccgacgcaagaattcgatacccgctggccgctgttggccgcacagctaaactaa
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