Pectobacterium parmentieri SCC3193: W5S_4675
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Entry
W5S_4675 CDS
T02514
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
W5S_4675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pec03021
]
W5S_4675
03400 DNA repair and recombination proteins [BR:
pec03400
]
W5S_4675
Enzymes [BR:
pec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
W5S_4675
Transcription machinery [BR:
pec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
W5S_4675
DNA repair and recombination proteins [BR:
pec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
W5S_4675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MINAR1_N
Motif
Other DBs
NCBI-ProteinID:
AFI92720
UniProt:
A0A0H3IBA6
LinkDB
All DBs
Position
5028777..5029052
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQIQTGGKDPLVPEENDKYTVIALREIEEGLIN
NQILDVRDRQEQQEQEAAEIQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaagacgctgtagagaaaattggtaaccgttttgacttggtg
ttggtcgctgctcgtcgcgcccgtcaaatccagactggcggcaaagatccgttggttcct
gaagaaaacgataagtacaccgtgatcgcactgcgtgagatcgaagaaggtctgatcaac
aaccagattctggatgttcgtgaccgccaggaacagcaagagcaggaagccgctgagatt
caagcggttaccgcaattgctgaaggccgccgttaa
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