Pectobacterium parmentieri SCC3193: W5S_4699
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Entry
W5S_4699 CDS
T02514
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec03030
DNA replication
pec03410
Base excision repair
pec03420
Nucleotide excision repair
pec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
W5S_4699
03410 Base excision repair
W5S_4699
03420 Nucleotide excision repair
W5S_4699
03440 Homologous recombination
W5S_4699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pec03032
]
W5S_4699
03400 DNA repair and recombination proteins [BR:
pec03400
]
W5S_4699
Enzymes [BR:
pec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
W5S_4699
DNA replication proteins [BR:
pec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
W5S_4699
DNA repair and recombination proteins [BR:
pec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
W5S_4699
NER (nucleotide excision repair)
GGR (global genome repair) factors
W5S_4699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFI92744
UniProt:
A0A0H3ICC5
LinkDB
All DBs
Position
complement(5053144..5055933)
Genome browser
AA seq
929 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEATGAMYGVLNMLRSLLQQYSPSHVAV
VFDAKGKTFRDELFENYKAHRPPMPEDLREQIEPLHNMVKAMGLPLLAVSGVEADDVIGT
LAVQAEKAGKSVLISTGDKDMAQLVTPSVTLINTMNNTILGPQEVCDKYGIPPELIIDFL
ALMGDASDNIPGVPGVGEKTAQALLQGLGGLDSLYANLDKIAGLSFRGAKTMAPKLEQHK
EVAYLSYQLATIKTDVELELSCDQLTVNELDVDELHRLFSRYEFKRWLSDIESGTWMQGK
KSSQPVQTVSNAVVEQAVEEDNAPTLSADGYVTILDEKTLLDWVERLKLADVFAFDTETD
GLDTLTANLIGLSFAIKPGEAAYLPLAHDYLDAPDQLDRATVLALLKPLLEDEKLLKIGQ
NLKFDKGVMQRYDIDLRGIAFDTMLESYVLDSVAGRHDMDSLAERYLKHKTITFEEIAGK
GKNQLTFNQIALEQAGPYAAEDADVTLHLHQTLWGKLQPHADLCQVFQTIDMPLVPVLSR
IERTGVLIDPAILAEHSKELTTRLAELEIQAYELAGEEFNLSSTKQLQGILYEKQKLPIL
KKTPKGAPSTNEEVLAELALDYPLPKLILEYRGLAKLKSTYTDKLPLMINPATKRVHTSY
HQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKGYSIVAADYSQIELRIMAHLSG
DEGLLNAFANGLDIHRATASEVFGIALDKVTSEQRRSAKAINFGLIYGMSAFGLSRQLNI
PRSESQKYMNLYFERYPGVQDYMERTRQQAAEHGYVSTLDGRRLYLPDIHSRNAMARKGA
ERAAINAPMQGTAADIIKKAMIAIDDWLQKDAPKVKMIMQVHDELVFEIDDSIVEESISK
IKVLMEGCMQLNVPLQVDIGTGMNWDQAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattgcagaaaatcccttaatactggtagacggttcatcttatttgtatcgt
gcctatcacgcttttccaccgttaacaaacagcgcgggggaagccaccggtgcaatgtat
ggcgtattgaatatgctacgcagtttgttgcagcaatatagccccagccatgttgccgtt
gtttttgatgcaaaagggaaaacgtttcgcgacgagttgtttgaaaactataaagctcac
cgcccacctatgccggaggatctacgcgaacagatcgagcctctgcataatatggtgaaa
gcgatggggttaccgcttctggcggtttctggcgtagaagcggacgatgtgattggtaca
ctcgcagtgcaggcggaaaaagccggtaagtcggtgctgattagcaccggcgataaagat
atggcacaactggtgacgccgagcgtaacgctcattaataccatgaacaacaccattctt
ggcccacaggaagtgtgtgataaatacggtattcctccagagctgattatcgatttcctc
gcgctgatgggggatgcatcggataacattcctggtgtgcctggcgttggggagaaaacc
gcccaggcgctactgcaagggctcggcgggctggattcgctgtatgcaaatctcgataaa
attgctgggctttccttccgtggtgcgaaaaccatggcgccgaagctggaacaacataaa
gaagtggcctacctctcttatcagcttgccactattaaaacggatgttgagcttgaactc
agttgcgatcagctcactgttaacgagctggatgtggatgagctgcatcgtctcttttcc
cgttatgaatttaaacgctggttatcagatattgaatcaggcacctggatgcagggtaaa
aagagcagccagcctgttcagactgtgagtaatgcggtggttgagcaggcggttgaagaa
gataacgcacctacgctgtctgccgatggttatgtcacgatccttgatgaaaaaacgctg
ttggattgggttgagcgtttaaaactggctgatgttttcgcttttgatacggaaactgat
gggctggatacgctcactgctaatctgattggtttgtcatttgcgattaagccaggcgaa
gcggcttatttaccgttggcacatgattatctggatgcgccggatcaattggatcgtgcc
acggtattggccttgttaaaaccgctgctggaagatgagaagctgcttaagattggtcag
aatctcaaatttgataaaggcgtgatgcagcggtatgacatcgatttacgcggcatcgcg
tttgataccatgctggaatcttacgtgctcgacagcgtggcgggtcgtcacgatatggac
agcttggccgagcgctatctgaaacacaaaaccattacctttgaagagatcgcgggtaaa
ggaaaaaatcaactgacgttcaatcagattgcattggaacaggctgggccgtatgcggcc
gaggatgcggacgttacgctgcatctgcatcagacactgtgggggaaactccagccgcat
gccgatctgtgtcaggtcttccaaaccatcgatatgccgctggttcctgttttatcccgc
atcgagcgtactggcgtgctgatcgatcctgcaattctggcggaacactcaaaagagcta
acaacccgtctggcggaattggaaatacaagcctatgagttggcgggcgaagagttcaat
ctctcatcgaccaagcagctacagggaattctgtatgaaaaacaaaagctgccgattctg
aagaaaacgccaaaaggtgcaccgtcaaccaatgaggaagtgctggctgaactggcgctg
gattaccctctgccgaagctaatccttgaataccgagggttggccaagctgaaatcgact
tacaccgataagttgccgctgatgatcaatccggcgacgaagcgcgtgcatacctcttat
catcaggctgttactgcaactggacgtttgtcttccagcgatcctaacctgcaaaacatc
ccggtgcgtaacgatgagggacgccgtattcgtcaggcattcattgcgcctaaaggttat
agcattgttgcggctgactactcgcaaatcgaactgcgtattatggcgcatctatcgggt
gatgaagggttgttgaatgcgttcgcaaacgggctggatatccaccgggcaacggcgtca
gaagtgtttggcatcgcgttggataaggtgacatcagaacagcgtcgtagtgcgaaagcg
atcaacttcggtctgatctacggcatgagcgcgtttggtttgtcgcgtcagttgaacatc
ccccgtagcgaatcgcagaaatacatgaacctgtattttgagcgttatcctggcgtgcag
gattacatggagcggacgcgccaacaggccgcggagcatggctatgtgtctacattggat
ggtcgccgtctctatttaccagatatccactcgcgtaatgctatggcgcgtaaaggcgcg
gaacgtgcggcgattaatgccccgatgcagggcaccgctgccgatattattaagaaagcg
atgatcgcgattgacgattggctacagaaagacgcgccaaaggtgaagatgatcatgcag
gttcacgatgagttggttttcgagattgatgattcgattgttgaagaatctattagtaaa
atcaaagtattaatggaaggttgtatgcaattgaatgttccgttgcaggtagacatcggt
acaggtatgaactgggatcaagcccattaa
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