Pectobacterium parmentieri SCC3193: W5S_4748
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Entry
W5S_4748 CDS
T02514
Name
(GenBank) Exopolygalacturonate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00040
Pentose and glucuronate interconversions
pec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
W5S_4748
Enzymes [BR:
pec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
W5S_4748
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Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
AFI92788
UniProt:
A0A0H3ICL0
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All DBs
Position
complement(5104928..5107162)
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AA seq
744 aa
AA seq
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MKRCSSQKCDFVRKHRSSRLAAVALTNALLFSFSAHAATESTPVWHGIAFGQSTDVNFSS
NVLPEKIGVNDVTINGKKLAPGDNVDLSAPITIESRGGKIANTHDGLTFFYTQLPANVNF
TLQSDITVEQFGPENGAKPAAQEGAGILVRDIIGIPRQEPLKEGYEEFPAASNMVMNAIM
TQDKKSHTEIKLQAILRNGVTQPWGNAGAKITKTSYQENVNLEQTPTFRLKLERTNDGFI
TSYAPKGTDNWVSKEVKGADVVTKLDKDHYYVGFFASRNAKITVSNAQLTTTPAQTKASP
EFKVKAYDPLLQVMSSPKTTSEHYVVQAKANYNGTIAVSQDGKSLGDAKQVKAGETFSLP
AKIAGNSAEFKIAYQPAEGDDKAVKESTFKVEKVAYADAKNLYVSPQGSASNDGSKNAPL
DLASAVAALPAGGTIWLNDGDYSATEIPVSASGQQKAVKNLFTVGNKAVIHGLQLKASHW
HVKGIEITEKPFRIEGSYNTIERVLAHHADDTGIQVTSTADVGRPLWASHNLILNSESHS
NQDPGKINADGFAVKMRVGEGNVIRGAFSHNNVDDGFDLFNKIEDGANGVVVIENSIAMN
NTSNGFKMGGEGQPVAHQVKHSIAVGNKLDGFTDNFNPGALIVEDNIALDNERFNFIFRP
SPYSGPEKQGVFKNNVSLKTKAGKYDDAVVGNIDNTNYFIKGDRSVNAQGKEVTVNNFVS
VIVPETFTRDAKGNLVLGDFLKKK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgttgttcttcacaaaaatgtgattttgtacggaaacaccgttcttcacgcctc
gcagccgtcgcgttgacgaatgcattacttttcagcttcagtgcacacgccgcgacagaa
tcaacacccgtctggcacggtatcgcctttggtcaatcaacagacgtaaacttttcatcc
aatgttctgccggaaaaaattggtgttaatgatgtcaccattaacggtaagaagttagcg
ccgggagacaatgtcgatttgtccgcacctatcacgattgagagtcgtggcggaaagatt
gccaatacccatgatgggttgacgttcttctatacgcagttgcctgccaatgtgaatttt
acacttcagtctgatattaccgtggaacaatttgggccagaaaatggtgccaagcctgcg
gctcaggaaggggcaggaattctggtgcgcgatattatcggcattccgcgtcaggaaccg
ttgaaagaagggtatgaggaattccctgcggcatccaacatggtgatgaacgccatcatg
acgcaggataaaaaatctcatactgaaatcaagctacaggcgattttgcgtaatggcgtg
acacagccgtggggcaacgcgggcgcgaaaattaccaaaaccagctaccaggaaaatgtc
aatctggagcaaaccccgactttccgtctgaaactggagcgcaccaacgacggcttcata
acctcttatgcaccgaaaggcacggataactgggtatcaaaagaagtcaaaggcgcagat
gtcgttaccaagctggataaagaccactactacgtcggtttctttgcctcccgtaacgcc
aaaatcaccgtcagcaatgcacagttgacgacgacaccggcgcaaaccaaagcctcaccg
gaatttaaagtcaaggcttacgatccgttactacaggtgatgtcatcgcctaaaaccacc
agcgaacactatgttgtacaggctaaagccaattacaacggcacgatcgccgtttcacaa
gacggtaaatcgctgggcgatgccaagcaggtaaaagctggcgagacgttctctctgcca
gcaaaaattgccggtaatagtgctgaattcaagatcgcctaccagcctgctgaaggggat
gataaagcagtaaaagagagcacgttcaaagttgaaaaagtggcttatgcagacgcaaaa
aatctgtatgtttcgccacaaggttcagccagcaacgacggcagtaaaaatgccccgctc
gatttagccagcgccgtcgccgctctaccagcaggcggcaccatttggctcaacgatggc
gattacagcgcaactgaaatccctgtcagcgccagcggccagcaaaaagctgtcaagaac
ctgtttaccgtcggtaataaagcggtcattcacggcctgcaactaaaagctagccattgg
catgttaaagggattgaaatcaccgagaagccgttccgtatagagggaagctacaacacc
atcgaacgcgttctggcgcaccacgctgacgataccggtattcaggtgacctcgacggcc
gatgttggcagaccactgtgggccagccataacctgatcctgaactcagaatctcacagc
aaccaggacccaggcaaaattaacgctgacggtttcgcggtgaaaatgcgtgtaggtgaa
ggcaacgtaatccgcggtgcgttctcgcacaacaacgtcgatgacggcttcgacctgttt
aacaaaattgaagacggtgcaaacggcgttgtggtgatcgagaattcaattgccatgaac
aacaccagcaatggcttcaaaatggggggtgaaggtcagccagtggcgcatcaggtcaaa
cacagcattgccgtgggcaataaacttgatggtttcactgataacttcaaccctggcgca
ctgatcgttgaagacaatatcgcgttagataacgagcgctttaacttcattttccgccca
agcccttactctggcccagaaaaacaaggtgtctttaagaacaacgtttcactgaaaacc
aaagcgggtaaatatgatgatgcagttgtcggaaatatcgataacaccaactacttcatc
aagggcgaccgttctgttaatgcgcaaggtaaggaagtcaccgtaaataacttcgtttcg
gttatcgtcccggagacgtttacacgtgatgccaaaggcaatctggtacttggcgatttc
ctgaagaagaaataa
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