Psittacula echo (Mauritius parakeet): 308217088
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Entry
308217088 CDS
T12082
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
pech Psittacula echo (Mauritius parakeet)
Pathway
pech04110
Cell cycle
pech04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
308217088 (SMC1B)
04114 Oocyte meiosis
308217088 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pech03036
]
308217088 (SMC1B)
Chromosome and associated proteins [BR:
pech03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
308217088 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
308217088 (SMC1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_15
OmpH
rve
Motif
Other DBs
NCBI-GeneID:
308217088
NCBI-ProteinID:
XP_080465949
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All DBs
Position
1:complement(<108669832..>108704119)
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AA seq
1235 aa
AA seq
DB search
MGYLKLLVMKDFKSWRGQQVIGPFMKFNCIIGPNGSGKSNIMDAVSFVMCEKTSNLRVKS
VQELIHGAHVGRPISSTASVKMVYCEEDGEEKTFSRVIRGNCSEFLFNNKSISRSAYISE
LEKIGILVKARNCLIFQGTVESIAMKKPRERTQLFEQISNSWEYAEDYERKKKKMQQAEE
DAQFNYNKKKSIAAERKQAKIEKEEAEHYQTLIKELDEEKIELQLFRLYHNEKNIYFLKK
RLDEKNMEASLKKESLSTAEDAFRAKKKRLGVLNRDQQHMERELKTLEASLIQQRPLYIK
AKENTSYQIKKVEMAKKLIRDKEKSCDKEKQNIKELETELNDIEKAWRAFEKKAEEILQR
AADIELGERQLERYKELKEIARKKVATLNQQLEKLRWEQKADEERLKLNWRKKKEVEGNI
KQTVEQVEEHKKRIEKLEEYAKICTESLAEKKQQEEVLTKEIENAKIRMAEVNEELNKVV
GELQNARMDYHEGRRQQMRAEILESLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKVFSKY
MTAIVVATEKTAKDCIRFLKQERAEPETFLALDYLDVKPINEKLREIKGAKMMVDVVQTP
FAPLKKVIQFVSGNGLVCETVKEAKQIAFDGPVRLKTVALDGTLFMKSGVISGGSSDLRF
KARYWDDKEMNAMKERRDSLINELKDLMKIKRKEADLKQLYAQCHGTQTRLKYSQSELEL
IKKKHLANLYTEKSKLESELVNIESQHDMLKEGVAQRKEKIEEFQKKINEVEDSVFQEFC
EEIGIENIRVYEQERVRQQEEIDKKRLEFENQKTRLNIQLEYNRDHLQKLTNTISKLRET
VHKDEAEITGLQKDEEKLLKTVNEIAEERQQFKDRLSAHKSEVTKAQNEVEEFRKTLLTL
NREATKLQKEATTIETALEEKRLKRHNMLLECKVQDLKIKLLSGLLDEISEVELGPETED
TQTTSSIYEREEAIQIDYSSLPEDLKDLDSDKDIQDHLKQMQQEIKSKESTLMKTAAPNL
RAVEKLQIARDKFQESIDAFETSRKEARTCKQEFEQVKKRRYELFSRCFEHASVAIDEIY
KKLCRNSSAQAFLSPENPEEPYLEGIGFNCVAPGKRFMPMDSLSGGEKSVAALALVFAIH
SFRPAPFFILDEIDAALDNTNIDKVSSFIREQAHEQLQMIVISLKEEFYSKADALIGVCP
EHDDIMFSRVLTLDLTEYPDSNDQERAEMHKRSSE
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggttacctcaagctgctggtgatgaaggatttcaagtcgtggcgggggcagcaggtt
ataggccccttcatgaagttcaactgcattatcgggcccaatggatcaggtaaatctaac
ataatggatgctgttagttttgtgatgtgtgaaaagacatctaatttgcgagttaaaagt
gttcaagaacttattcatggagcacatgttggaagaccaatttcttctaccgctagtgtg
aagatggtatattgtgaagaagatggggaagaaaaaacattttcaagagttatccgtggt
aattgttctgaatttcttttcaataataagtctatcagccgatctgcttacatatctgaa
cttgaaaaaataggcatacttgtcaaagctaggaattgcctgatttttcagggaacagta
gaatcgattgcaatgaagaagccgagggagagaactcaactttttgaacagatcagtaat
tcatgggaatatgctgaagactatgaacggaaaaagaaaaaaatgcagcaagcagaagaa
gatgcgcagtttaattacaacaagaagaaaagcattgcagcagaacgcaagcaagcaaag
atagagaaagaggaggcagagcattaccagacacttatcaaagaactggatgaagaaaag
atagaattgcagcttttccggctttatcacaatgaaaaaaacatttactttctgaaaaaa
aggttggatgaaaagaacatggaggctagtctcaaaaaagagtctctttctacagcagag
gatgcatttagagccaagaagaaaaggcttggtgtactaaacagagaccagcagcacatg
gaaagagaactgaagactctggaagcatcgctgattcagcagagacccctctatataaaa
gcaaaggaaaacacttcctaccaaatcaagaaagtagaaatggcaaaaaaattgataagg
gacaaggagaaatcctgtgataaggaaaagcagaacataaaagaactagagacagaatta
aatgatattgagaaggcgtggagagcatttgagaagaaagctgaagaaatattgcagaga
gcagcagatattgagctaggagaaagacagttggagcgttacaaagagctaaaggaaata
gcaagaaagaaagtagctacactaaaccagcagctagaaaagcttcgttgggagcaaaaa
gcagatgaagaaaggctgaaacttaattggaggaagaaaaaagaagttgagggaaacata
aaacagactgtggaacaggtagaagagcataaaaaacggatagagaagttggaagaatat
gccaagatatgcactgaatcattagcagaaaaaaagcagcaagaggaagtactaactaag
gaaattgaaaatgcaaaaatacgaatggctgaagtgaatgaagaattgaacaaagtagtt
ggtgaactgcagaatgccagaatggattaccatgaaggaaggcgtcagcaaatgagagca
gagatcctggaaagtctcaaaagactatatccggattctgtgtttggaagactgctcgac
ctgtgtcatcctattcataagaagtaccagcttgctgttaccaaggtattcagcaaatat
atgactgctattgttgttgccactgaaaaaacagcaaaagattgcattcgcttcctaaaa
caagaacgagctgaacctgaaacttttcttgctctggattacctcgatgttaaaccaatc
aatgaaaagttaagagagataaaaggagctaaaatgatggtggatgttgtgcaaactcca
tttgctccactgaaaaaagtgattcagtttgtgagtgggaatggcttggtctgtgaaaca
gttaaagaagcaaaacaaatagcatttgatggaccagtgaggttgaaaacagtggctctt
gatggaactttatttatgaagtctggagtgatttctggaggatcaagtgatttaagattt
aaagctagatactgggatgataaagaaatgaatgcaatgaaagaaagaagagatagcttg
attaatgagctaaaggacttaatgaagatcaagcgtaaggaggctgacttgaagcagttg
tatgctcagtgccatggcacgcagacacgacttaaatactcacagagtgaattagagctt
attaaaaagaaacatcttgctaatctctacacggagaaatcaaaactggaaagtgaactg
gtaaatattgagtctcagcatgatatgctgaaggaaggagtagcacaaagaaaagaaaaa
atagaagaatttcagaagaaaattaatgaggttgaagattctgttttccaggaattctgt
gaagaaattggtatagaaaatattcgtgtgtatgaacaagaacgtgtgagacaacaagag
gagattgataagaaaagactggaatttgaaaatcagaagacaagactaaatattcagctg
gaatataaccgtgatcatctacaaaagttaacaaacaccatcagcaagttgagggagact
gttcataaagatgaagctgagattacggggctacagaaggatgaagaaaagcttctaaaa
acagtgaatgaaattgcggaggagcggcaacaatttaaggatagattaagtgctcataaa
tccgaggttacaaaagcccaaaatgaagttgaagagttcagaaagacattattaactctt
aatagagaagctacaaaattacaaaaagaagctacaactatagaaactgctctggaagag
aaaagattgaaacgacataatatgcttctcgaatgcaaggtgcaggacttgaaaataaag
ttgctatctggattactggatgagatcagtgaagttgagctaggacctgaaacagaagac
actcagactacatccagtatctatgaaagggaagaggcaattcagatcgactacagcagc
ctaccagaagacctgaaggacctagactctgataaagatatacaggatcatctgaaacag
atgcagcaggaaataaaatctaaagagagtactttaatgaagacagctgctccaaacctg
agagcagtagagaaactacagatagctcgggacaagttccaagaatcaatagatgctttt
gagaccagcaggaaggaagctagaacttgcaagcaagaatttgaacaagtgaaaaaaagg
agatacgagctattcagccggtgcttcgagcacgcctctgtagctatcgatgagatctac
aagaaactttgtaggaacagtagtgctcaggcattccttagtcctgaaaatcctgaggag
ccttacctggaaggcattggctttaactgtgtggctccaggaaaacgctttatgccaatg
gatagcttgtcaggaggtgaaaaatctgtggcagccctggctcttgtgtttgctatacac
agttttcggccagcacctttctttattttagatgagatagatgctgccctggataacaca
aacatcgataaagtatcaagtttcattagagagcaggcacatgagcagttacaaatgata
gttatttctctaaaggaagagttttattccaaagcagacgcattgattggagtgtgtcca
gagcacgatgacattatgttcagtcgagtcctgactttggatcttacagagtatccagac
agtaatgaccaggaaagagcagagatgcacaaacgcagttcagaataa
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