Psittacula echo (Mauritius parakeet): 308218279
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Entry
308218279 CDS
T12082
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform 1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pech Psittacula echo (Mauritius parakeet)
Pathway
pech03015
mRNA surveillance pathway
pech03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
308218279 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
308218279 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pech03019
]
308218279 (CPSF6)
Messenger RNA biogenesis [BR:
pech03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
308218279 (CPSF6)
SSDB
Ortholog
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GFIT
Other DBs
NCBI-GeneID:
308218279
NCBI-ProteinID:
XP_080468238
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Position
1:complement(127253884..127292880)
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AA seq
583 aa
AA seq
DB search
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDSLPPSV
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
SGEGKAGPPGGSSRAAFPPSNRGRGRFPGAIPGGDRFPGPAGPGGPPPPFPAGQTPPRPP
LGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPV
PGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPA
FFPPPANSGIPTSDSRGPPPTDPYGRPPPYDRGDYGPPGRRFTGNNMSIREKLHIPFYGR
HTKNNTQNSGREMDAARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGSAIETLV
TAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRSREKSRR
HKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcgtggaccacatcgacatctacgccgatgtgggcgaggaattcaaccag
gaagctgaatatggtggccatgatcaaattgatttgtatgatgatgtaatttctccatct
gcaaataatggagatgctccagaagatcgtgattacatggattctctcccaccatctgtt
ggggatgatgtaggtaaaggagctgcaccaaatgttgtctatacatatactggaaagaga
attgccttgtacattggaaatcttacttggtggacgacagatgaagacctgactgaagct
gttcattcactgggggtgaatgatattttggagataaaattttttgaaaaccgtgctaat
ggccagtctaaaggatttgcccttgtgggtgtgggatccgaagcatcctccaaaaagttg
atggatttgttgcctaaaagagaattgcatgggcagaatcctgttgtaactccatgtaat
aaacaatttctgagtcagtttgaaatgcagtcaaggaaaaccacacagtctggccagatg
tctggggaaggtaaagctggtcccccaggaggaagctcacgtgcagcatttccacctagt
aacagagggcgaggccgttttccaggtgccattccaggtggagacagattccctggacca
gcagggccaggagggcccccaccacctttcccagctggacaaactcccccacgtccacct
ctaggtcctcctggcccaccaggcccaccaggccccccacctcctggtcaggtcctccca
cctccattagctggacctcctaatcgtggggaccgtccaccaccaccagttctgtttcca
ggacagccttttggtcagcctccacttgggcctcttcctccaggtcctccaccaccagtt
ccaggctatgggccaccaccaggtccgccaccacctcagcagggtccacctccacctccg
ggtccgtttccccctcgtccacctggccctcttgggccacccctgactcttgctcctcct
cctcatctccctgggccacctccaggtgctccaccacctgcaccacatgtgaatccagct
ttcttccccccacctgccaatagcggcatacctacttcagacagccgtggcccacctcca
acagatccatatggccgacctccaccatatgacagaggtgactatgggccacctggaagg
cgtttcactggaaataacatgtccataagagaaaaattacatattccattctatgggagg
cacacgaaaaataatactcaaaactcagggagagaaatggatgctgcaaggacacctcta
agtgaagcagaatttgaagaaatcatgaatagaaatagggcaatctcaagcagtgccatt
tcgagagctgtatcagatgccagtgctggggactatggaagtgctatagagaccttggta
actgcaatttccttaattaaacagtccaaagtatctgcggatgatcgctgtaaagtactt
attagctctctccaggactgccttcatggaattgagtcaaagtcttatggttctggatcc
agaagacgtgagcgatccagagagagggaccacagtaggtcacgagagaaaagtaggcgc
cacaaatcacgtagtagagatcgtcatgatgactattaccgggaaagaagccgtgagaga
gagaggcatcgtgatcgtgacagagatcgtgacagagaacgagacagagagagagaatat
cgtcatcgttaa
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