Psittacula echo (Mauritius parakeet): 308218668
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Entry
308218668 CDS
T12082
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pech Psittacula echo (Mauritius parakeet)
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pech03000
]
308218668 (SOX1)
Transcription factors [BR:
pech03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
308218668 (SOX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
308218668
NCBI-ProteinID:
XP_080469086
LinkDB
All DBs
Position
3:complement(65486120..65489155)
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AA seq
377 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGQTGAGGGGGGGGGGGGGGGGNKANQDRVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYK
YRPRRKTKTLLKKDKYSLAGGLLSAGSAGGGPAGVGVGMGVGVSPGGVGQRLESPGGTAG
GGYAHMNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGSGGHPHHPHPHHPHHPHNPQ
PMHRYDMGTLQYSPISNSQGYMSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGAL
GALGSLVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAAAAQSRLHSLPQH
YQSASTGVNGTVPLTHI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcccccggaggagcccaggcccccacg
aacctctcggggcaaaccggagcgggaggaggtggtggcggcggtggtggcggcggtggc
ggcggaggggggaacaaagcgaaccaggaccgggtcaagagacccatgaacgccttcatg
gtgtggtcgcggggccagcggcgaaagatggcccaggagaaccccaaaatgcacaactcg
gagatcagcaagcgcctgggggccgagtggaaagtcatgtcggaggccgaaaagagaccc
ttcattgacgaggcgaagcgactgcgggcgctgcacatgaaggagcacccggattataaa
taccggccccggcggaagaccaagaccctgctcaagaaggacaagtactcgctggccggg
gggctgctgagcgccggctcggccggaggaggcccggccggcgtcggtgtgggcatgggc
gtcggcgtcagtcccggcggcgtcgggcagcggctggagagtcccggcggcactgccggc
ggtggctacgcgcacatgaacggctgggccaacggcgcctacccgggctcggtggcggcg
gcagcggcggcagcggcgatgatgcaggaggcgcagctcgcctatggccagcacccgggc
agcggggggcacccgcaccacccgcacccacaccacccgcaccacccgcacaacccgcag
cccatgcaccgctacgacatgggcactctgcagtatagccccatctccaactctcagggc
tatatgagcgcctcaccctcgggctacggcgccctgccctacggctcccagccccaccag
aactcggcggcggcggcggcggcagcggcggcggcggcggctgcctcctcgggggcgctg
ggcgccctgggctctctggtgaagtcggagcccagcgtgagccctcccgtcacctcgcac
tcgcgggccccgtgccccggggacctgcgggagatgatcagcatgtacttaccggcggga
gaaggcggggatcctgcggcagcagccgcccagagcaggctccactccctgccccaacac
taccagagcgccagcacgggggtgaacggcaccgtccccttgacgcatatctga
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