Psittacula echo (Mauritius parakeet): 308220912
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Entry
308220912 CDS
T12082
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform 1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pech Psittacula echo (Mauritius parakeet)
Pathway
pech04137
Mitophagy - animal
pech04140
Autophagy - animal
pech04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
308220912 (HIF1A)
04137 Mitophagy - animal
308220912 (HIF1A)
04148 Efferocytosis
308220912 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pech03000
]
308220912 (HIF1A)
Transcription factors [BR:
pech03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
308220912 (HIF1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
308220912
NCBI-ProteinID:
XP_080473651
LinkDB
All DBs
Position
5:complement(71664153..71695283)
Genome browser
AA seq
811 aa
AA seq
DB search
MDSPGGVTDKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIM
RLTISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCM
GLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGR
TVNIKSATWKVLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECM
LKPVDSPDMKMTKIFSKDDLEDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDE
QQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNT
EPLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPNNYCFDVDNDMANEFKLELVEKLFAI
DTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSGSQNAATITIFQQT
QTPSSTADDIKPVTERVDDVKTLIVPSSPVHIINETSSAPGSPYSGNRSRTASPIRAGKG
TSDQTEKSCPGAPGLLTVTLNKRSTAMDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIG
SLFQQTGDRGGNASLAWKRVKGCKTNGHNGVEQKTIILLSTDIASKLLGQSMDESGLPQL
TSYDCEVNAPIQGNRNLLQGEELLRALDQVN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggacagccccggcggcgtcaccgacaagaagaggattagctcggaacgcagaaaagag
aagtcaagagatgcagcccggtgccgaaggagcaaggaatcagaagtattctatgagctt
gcccatcagcttcccttgcctcacactgtgagtgcacatctggacaaggcatccattatg
agactgaccatcagctacttgcgcatgagaaagctgctagatgctggtgagctggagaca
gaagccaaaatggagaaggaactgaactgtttctacttgaaagctcttgatggatttgtc
atggttctgtctgaagatggggacatgatttacatgtctgaaaacgtgaacaagtgtatg
ggactcactcagtttgagttgacggggcacagtgtatttgatttcactcatccatgtgac
catgaagagctgagagaaatgcttacacacagaaatggtcctgtgaaaaagggcaaagag
caaaataccgagcgcagcttttttctcagaatgaagtgtacactgactagcaggggaaga
acagtaaatatcaagtctgctacatggaaggtactccactgcactggacacatacgtgta
tatgacacatgtggtaatcaaactcactgtggctacaaaaagcctcccatgacatgtctg
gtgttgatctgcgaacctattcctcatccatcgaacattgaggtccccttggacagtaaa
acgttcctcagtcgtcacagtcttgatatgaaattttcatattgtgatgaaagaataaca
gagttgatgggatatgagccagaggaactcctgggtcgctcaatctatgagtactatcat
gcgctggattctgatcatctgaccaaaacacaccatgacatgttcaccaaagggcaggtg
acaacaggacagtacagaatgcttgctaaacaaggtggctatgtctgggttgaaactcaa
gcaactgttatatacaacactaagaattctcagccacagtgcatagtttgtgtaaactat
gtgttgagtggaattgttcagaaggacttgattttttcccttggacaaactgagtgtatg
ctgaaaccagtggattctcctgatatgaaaatgaccaaaatattcagcaaagatgacttg
gaagataccaacagcctatttgaaaaactgaagcaggaaccagatgctttaactgtgctg
gccccagctgctggagacacaattatctctctagatttcagcagtaatgagtctgatgaa
caacaatgtgatgaagttcctttgtataacgatgtaatgctcccctcatccagtgagaaa
ttgcagaatataaatatggcaatgtccccactacctgcttctgaaactacaaagccactt
cgtagcaatgctgatcctgcactaaatagagaagttgtatcaaagctggagccaaacaca
gagccactcgaactttcttttaccatgcctcaggtgcaagagcaaccaaccagcccttct
gatgcaagtaccagccaaagttcacctgagcccagtagtcccaacaactactgctttgat
gtggataatgatatggctaatgaattcaaactggaattagtggagaaactctttgcaata
gatacagaggcaaaaaatccattctctactcaggaaactgatttagatctggagatgttg
gctccttatataccaatggatgatgacttccagttgcgatccttcgatcagctgtctcca
ctggaaagcagttcttctggctctcagaatgcagccaccattaccatatttcagcagact
cagacaccatcaagtactgctgatgacataaaaccagtgacggaacgtgtggatgatgtg
aagacgctaattgttccttcatctcctgttcacataatcaatgaaacgagtagtgccccg
ggatcgccttacagtgggaacaggagtcgaactgcatctccaatcagagcaggaaaagga
acatcagatcagacagaaaaatcttgtcctggagcacccggtttgctaacagtcactctg
aataaaagatctactgcaatggatgaagaactaaatccaaagatgctagctttgcataat
gctcagagaaaacgaaaaatggaacatgatggttcactttttcaggcagttggaattggg
tctttattccagcagacaggtgaccgtggaggaaatgcatcacttgcttggaaacgtgtg
aagggatgcaaaacaaatggccataatggagtggagcaaaagacaatcattctactatca
actgacatagcgagtaaacttctagggcagtcgatggatgaaagtgggctaccccaactc
acgagttacgattgtgaagtaaacgctcccatacaaggcaacagaaacctgctacagggt
gaagaactgctcagagctctggatcaagttaactga
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