Psittacula echo (Mauritius parakeet): 308223431
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Entry
308223431 CDS
T12082
Symbol
RUBCN
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform 1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
pech
Psittacula echo (Mauritius parakeet)
Pathway
pech04140
Autophagy - animal
pech04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
308223431 (RUBCN)
04140 Autophagy - animal
308223431 (RUBCN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pech04131
]
308223431 (RUBCN)
Membrane trafficking [BR:
pech04131
]
Autophagy
Other autophagy associated proteins
Others
308223431 (RUBCN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
308223431
NCBI-ProteinID:
XP_080478493
LinkDB
All DBs
Position
7:complement(28346319..>28377834)
Genome browser
AA seq
1091 aa
AA seq
DB search
MRRVWPRMRPSHPGSSSSRVRSNLPSALRADACAGDSSCLPSCWELACRPLPVGRSRKEH
WKLLGNLKTTVEGLVSTSNPNVWSKYGGLERLCRDMHSILYHGLIHDKVCCRQDYWQFVK
DIRWLSPGSAHHLEKFISLQESSQPGPEGPGEQAIAQLWLQHSLQCHCLSAQLRPLLGNR
QYIRKFYADTAFLLSDAHVTAMLQCLEAVEQNNPRLLAQIDTSMLAGTSLPSLCASGPSA
GTREMCDHNSEEHESRLSGALGCLDHFAESLLTRKSDGPPPVTKSQSLTALPASPYIPVA
GCMQQRCFGSASSLYSPASSGLSDRKSVSNSISSSASQPQECCPSTRSSSFSEGRSPLEQ
PSSVTHFNVPSPKDPFSPASEMSSSTTSQSEDTWMGSQDDPQSDVNDGPEYLAIGNSGRQ
GRACSSASTNSTKSSSSKLFSSSSSQKLDSVSSLGEQGASGGGSRGLSLLRRSSFSEGQS
SATQGILKKSHVRSHSDTNVASGKLHGGLRDITIIIEDPVAESHDDPSGGRRPISASTQS
SELSTPSSLYMEYDSGQYLSSGEGMFRRPSEGQSLISYLSEQDFGSCADLEKENAHFSIS
ESLIAAIELMKCNMMSRQLEEEEEEDSDKEIQELKQKIRIRRQQIRTRHLYPTCQGMGSD
SLVVTDSGSQFSSHGSMRLSDSGSAEDVEEYEIRDGNDGSNLIQMSKNGLSVSMASLFSG
ADIKRNPDSSRKSFLSSESISHSFLNSNSAEAVAMGLLKQFEGMQLPAASELEWLVAEHD
APQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFNVHPAPTRKVAVAK
QNYRCAGCGIRTDPDYIKRLRYCEYLGKYFCQCCHENAQMVIPSRILRKWDFSKYYVSNF
SKDLLSKIWSDPLFNVQDINPALYRKVKSLNQVWLLRIQLFHMKNMFKTCRLAKDLLDSF
DMVPGHLTEDLHLYSLSDLSATKKGELVPRLTELLKAGSLHVEKCMLCQAKGFICEFCQN
ESDIIFPFELNKCSTCEECKACYHKSCFRSTRCPRCERLQARKELLAKQSMESYVSDYEE
ELEQSEVVAAT
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagggtgtggccacgcatgcgcccttctcacccgggctctagtagctcacgcgtg
cgcagtaatctcccctccgccctgagagcagacgcctgcgccggggacagcagctgcctc
ccctcttgctgggaattggcgtgccgccccctgccggtcggaaggagcaggaaggagcac
tggaagctactaggcaacctgaagaccacagtggaaggtttggtgtccaccagcaaccca
aatgtctggtccaagtatggtggcttggaacggctctgcagagatatgcatagcatcctc
tatcatgggctcatccatgacaaggtgtgctgcagacaggattactggcagtttgtgaag
gacattcgctggctgagtcctggctctgctcatcacctggagaagttcatcagcctgcag
gagagcagccagcctggccctgagggcccgggggagcaggccatcgcacagctgtggctg
cagcacagcctgcagtgccactgcctgtcagcacagctgagaccgctcctggggaaccgg
cagtacatcaggaaattctatgcagacactgccttcctgctcagtgacgcacatgtcacg
gccatgctgcagtgcctggaggctgtcgagcagaacaaccccaggcttctagctcagatc
gacacctccatgctggccggcacgtcactgccatccctgtgcgcatcaggtccttctgct
ggtacaagagagatgtgtgaccacaactctgaagaacatgagagccgcctgtctggggcg
ctgggctgcctggatcatttcgctgagagcctgcttaccaggaagagtgatggtccacct
ccagtgaccaagagtcagagcctgactgcccttcccgcatccccatacatcccggttgca
ggctgcatgcagcagcgctgctttgggtctgcctccagcctctactctccagcctcctct
ggcctctcagacaggaaatcagtgagcaactccatcagctccagtgccagccagccccag
gaatgctgcccatccacccggtcttcctccttcagtgagggcaggtcccctctggagcag
cccagctctgtcacccacttcaatgtaccctcacccaaagaccccttctctccagccagt
gagatgagctccagcaccaccagccagagtgaggacacttggatggggagtcaggatgat
cctcagagcgatgttaatgatgggccagagtacctggccattggaaactcggggcgccag
ggccgagcatgcagcagtgctagcaccaacagcaccaagagcagtagctccaaactcttc
tcctccagcagctcccagaagctggactcggtctcatccctgggggagcagggggcaagc
ggaggtggaagcaggggcttgagcctgttgcgccggtccagcttctcagaaggacagtcg
tcagctacacagggcatcctcaagaagagccacgtgcgctcacactctgacaccaatgtg
gcttcggggaagttgcacggaggcctcagggatatcaccattataatagaagatccagtg
gcagagtcccacgatgatccaagtggagggagaaggccgatctctgcttctacccagagc
agtgaactgagcacacccagctcgctgtacatggaatacgactctggacagtacctgagc
tcaggggaagggatgttcagaagaccctcagaagggcagtccctcatcagctacctctct
gagcaggactttggaagctgtgcagacctggagaaggagaatgcccacttcagcatctca
gagtccctgattgctgccattgagctgatgaaatgcaacatgatgagccgacagctggag
gaggaggaggaggaagacagcgacaaggaaatccaggagcttaaacaaaagattcgcatt
cggcgccagcagatccgcaccaggcacctgtaccctacctgccaggggatgggctctgac
agtcttgtggtgacagatagcgggtcccagttcagctcccatggctccatgcgactctct
gactctggctccgctgaggatgtggaagagtacgagattcgagatggtaatgatggatct
aacctgattcaaatgtccaagaacggcctctcagtgtcaatggcttccttgttctcaggt
gcagacatcaagaggaacccagactccagcaggaagtcctttctctcctcagagtccata
tcccattccttcctcaattccaactcggcggaggctgtggccatgggcttgctgaagcag
ttcgagggcatgcagctcccagctgcctctgaattggagtggctggtcgccgagcatgat
gctccacagaagcttctacccatccccgactctctgcccatctctcctgatgatggagaa
catgctgacatctacaagctgaggattcgggtgcgcggaaacctggagtgggcccctcca
cgaccacagatcatcttcaatgttcacccagccccaacgaggaaggtggctgtagccaag
cagaattaccgatgtgcaggctgtggcatccgaactgatcctgattacatcaagcgactg
cggtactgtgagtacctggggaagtatttctgccagtgctgccatgagaatgcccagatg
gtcatccccagccgcatcctgcgcaagtgggacttcagcaagtactacgtgagcaacttc
tcaaaggacctactgagtaagatctggagtgacccgctcttcaatgtgcaggatatcaat
cctgccctgtaccggaaagtgaagtctctcaaccaagtgtggctgctgcgaatccagctt
ttccacatgaagaacatgtttaagacatgccggctagctaaagacctccttgactccttt
gatatggtgcctggccacttgacagaggatttacacctctactcgctcagtgacctcagt
gccacaaagaaaggggagctggtgcctcgcctgactgagctcctgaaggcaggcagtctg
cacgttgagaagtgcatgctgtgccaagccaaaggtttcatctgtgagttctgccagaat
gagagtgacatcatcttcccttttgagctcaacaagtgcagcacatgtgaagagtgcaaa
gcctgctaccacaaatcctgcttcagatccacccgctgtccccgctgtgagcggcttcaa
gctcggaaagagctgctggccaagcagagcatggagtcctacgtctcagactacgaagag
gagctggagcagtcggaggtggtggcagccacatga
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