Psittacula echo (Mauritius parakeet): 308223446
Help
Entry
308223446 CDS
T12082
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform 1
KO
K14315
nucleoporin NDC1
Organism
pech Psittacula echo (Mauritius parakeet)
Pathway
pech03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
308223446 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pech03019
]
308223446 (NDC1)
Messenger RNA biogenesis [BR:
pech03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
308223446 (NDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
308223446
NCBI-ProteinID:
XP_080478540
LinkDB
All DBs
Position
7:6411586..6433019
Genome browser
AA seq
680 aa
AA seq
DB search
MEPGAGAGRQRALLRQVLGWRVAAAVAWSVLLLPVCTAAFVVLSGLDPFHPVRWISNSFN
DLYTSYVIFCILLMSVVILVVSIFNAEFYAVVPSIPCSRIALIGKIIHPQQVIHSVVHAV
MGMLVAWCAAVMTKGKFQFLAVPCTPSESLDNAAPQMCLNEYHLFFLLSGAFMGYSYSLL
YLINNMNYLPFPIIQQYKYLRFRRSLPLLIRHSCVESLYFVRNFCATYYFFGYIPKVWIS
TTMDLHIDSKLHPLDTLTGLLDISLFYHAWLCGVFLLITWYIAWLLFKIYATETHHFPVQ
PTFAEETDQCLPKILNSNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWAA
ISRECLNLLSDLTQRLITQQEAAAANGRAKLPAGELKIPLQTPACSLLSGAVATEGMSFQ
SQRSNIIPRASMSSMVKSSLMSLKASPGSDVGSPFSSPALNGKMGILDVKSPWHGSAQSP
YVMRRGPKLWTSATDLHMNGSHHESFPELSAAKAGHEAVQPTFIYMWLQNKQEQIKTFLS
KRVLIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILNT
LLTLQEVVDRHFKLPHVSSKPPRVSGSLVDTSYKTLRFALRASLKTALYRITAVFGEHLN
AVQVSTEHKKRLQQFLEYKE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggagcccggggcgggagcgggccggcagcgagcgctgctccgacaggtgctgggctgg
agggtggcggctgccgtcgcctggtccgtgctgctgctgcccgtctgcaccgcggccttc
gtcgtgctcagcggcctcgaccccttccacccggtgcgctggatctcgaattctttcaat
gatttatacacttcctacgtcatcttttgtatcctccttatgtctgtggtgattctagta
gtaagcatcttcaacgctgagttttatgcagttgtgccatcaataccatgctctcgaata
gcactgataggaaaaattattcaccctcagcaagttatccattctgttgttcatgccgtc
atgggaatgttggttgcttggtgtgctgcagtgatgacaaaagggaagttccagtttctt
gctgtgccctgcacaccttcagaaagcctagacaatgctgctcctcagatgtgcctaaat
gagtatcacctcttttttctactttctggagctttcatgggatacagttacagccttttg
tatcttattaacaacatgaattatttgccatttccaatcatacagcaatacaagtacttg
cgtttcagaagatctttgcccctcctcattagacacagttgtgtggaatcactatatttt
gttagaaacttctgtgccacatattacttttttggttacatcccaaaggtatggataagt
accacaatggatcttcatatagacagtaaattacatcctcttgacactctgactggctta
ttggatatctccttgttttaccatgcctggttatgtggtgtgtttcttctgattacctgg
tatattgcatggttactcttcaaaatctatgctacagagacacaccattttcctgtccag
ccaacttttgctgaggagacagaccagtgcctgcctaaaatcctgaacagcaatcctccc
ctcattataaagtttttagccttacaagacttaatgttactttcccagtattcccctgtt
cgacgacaagaagtctttagccttagtcagccaggtgggcacccgcacaactgggctgcg
atatcaagagagtgtttgaatcttctgagtgatctgacccagaggctgatcacacagcag
gaagctgcagcagcaaatgggagagcaaagctgccagcaggagagctgaaaatacctctg
cagactccagcgtgttctttgttgtcaggagctgttgcgacagaaggcatgtctttccag
tcacagagatcgaatatcattcccagagcttccatgtcttcaatggttaaatcatcacta
atgtctttaaaggcatcgccggggtctgatgttggttcacctttcagctcacctgcttta
aatggcaagatgggaattctggatgtaaagtctccttggcatggatcagcccaaagtcct
tatgttatgaggaggggcccaaagctgtggacgtcagctacagatctgcacatgaatggt
tcccaccatgaatccttcccagagctctctgctgcaaaagctggccatgaagcagtacag
ccaacatttatttacatgtggcttcagaacaagcaagaacagataaaaaccttcttgtca
aaacgagtgctgataatgtatttcttcagtaagcacccagaagcctccatccaagctgtc
ttctctgatgcccaaatgcacatctgggctttggaaggtctgtctcatttggtagcagct
tcctttactgaggaccaatttggagttgttcaaactacgctgccagctatcctgaatacc
ttactgactcttcaggaggttgtagacagacacttcaaactgcctcatgtttctagcaag
ccccccagggtgtcaggaagtctggtggatacctcctataaaactctacggtttgctctt
agagcatctctgaaaacagccctgtaccggataactgctgtctttggagagcacttgaat
gcagtgcaagtgtctacagaacacaagaaaaggcttcagcaattcttggaatacaaagaa
taa
DBGET
integrated database retrieval system
