KEGG   Psittacula echo (Mauritius parakeet): 308226451
Entry
308226451         CDS       T12082                                 
Symbol
SDC4
Name
(RefSeq) syndecan-4
  KO
K16338  syndecan 4
Organism
pech  Psittacula echo (Mauritius parakeet)
Pathway
pech04512  ECM-receptor interaction
pech04514  Cell adhesion molecule (CAM) interaction
pech04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pech00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    308226451 (SDC4)
   04514 Cell adhesion molecule (CAM) interaction
    308226451 (SDC4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    308226451 (SDC4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:pech00535]
    308226451 (SDC4)
Proteoglycans [BR:pech00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   308226451 (SDC4)
SSDB
Motif
Pfam: Syndecan Protocadherin
Other DBs
NCBI-GeneID: 308226451
NCBI-ProteinID: XP_080484277
LinkDB
Position
12:complement(5625521..5644936)
AA seq 202 aa
MLLPRASPVLRALLLGLLLRAAAAESVRETETIDARWLEYPASGDLPDDEDIGEFRPHLT
SDELDIDETSGSGDYLDSEDAIYLTTMDAPVISDNYIPGDTEGKIEGKGKNTMVDNEIIP
GKAVPVEENLPNKISAASTANSSIFERTEVLTALIAGGAVGLLFAVFLILILVYRMKKKD
EGSYDLGKKPIYKKAPTNEFYA
NT seq 609 nt   +upstreamnt  +downstreamnt
atgctgctgccccgcgcctcgccggtgctccgtgctctgctgctcggcctcctcctgcgc
gccgctgccgccgagtcggtgagagaaacagagaccatagatgcccgatggcttgagtac
cctgcctctggagacttgccagatgatgaagacattggtgaattcaggcctcacttaact
tctgatgagttagatatagatgagacatctgggtctggagactacttggactctgaagat
gccatatatctgaccaccatggatgctcctgtgatatctgacaactatatccctggagat
actgaggggaagatagaagggaaggggaagaacacaatggtggacaatgaaatcattcca
ggcaaagctgtacctgttgaagagaacctgcccaacaagatctctgcggcaagtacagcc
aacagcagcatctttgaaagaacagaagtccttacagctctcattgcaggaggggcagtg
ggcctcctgtttgctgtcttcctgatcctcatcttagtctatcgcatgaagaaaaaggat
gaaggcagttacgaccttgggaagaaacccatctacaagaaagccccaacaaatgagttc
tatgcttaa

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